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scnpilot_p_inoc_scaffold_1447_curated

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1447_curated_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

342..611
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MHB2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK88602.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1447_curated_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(642..1769)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MHA8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK88598.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1447_curated_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1775..4303)
DNA (2529bp) protein (843aa)
Uncharacterized protein (Fragment) n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUI0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK92870.1}; Flags: Fragment;; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
ABC transporter permease; K02004 putative ABC transport system permease protein
scnpilot_p_inoc_scaffold_1447_curated_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4401..4568
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUH9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK92869.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1447_curated_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5010..6209
DNA (1200bp) protein (400aa)
Glycine betaine/L-proline ABC transporter ATPase {ECO:0000313|EMBL:EIK92868.1}; EC=3.6.1.3 {ECO:0000313|EMBL:EIK92868.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
glycine betaine/L-proline ABC transporter ATPase; K02000 glycine betaine/proline transport system ATP-binding protein [EC:3.6.3.32]
Glycine betaine/L-proline ABC transporter ATPase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUH8_9BURK
scnpilot_p_inoc_scaffold_1447_curated_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6223..7401
DNA (1179bp) protein (393aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUH7_9BURK
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EIK92867.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
binding-protein-dependent transport system inner membrane protein; K02001 glycine betaine/proline transport system permease protein
scnpilot_p_inoc_scaffold_1447_curated_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7398..8420
DNA (1023bp) protein (341aa)
Glycine betaine transporter periplasmic subunit n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUH6_9BURK
Glycine betaine transporter periplasmic subunit {ECO:0000313|EMBL:EIK92866.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
glycine/betaine ABC transporter substrate-binding protein; K02002 glycine betaine/proline transport system substrate-binding protein
scnpilot_p_inoc_scaffold_1447_curated_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8454..9089)
DNA (636bp) protein (212aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
endonuclease III (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18]
Endonuclease III n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUH5_9BURK
scnpilot_p_inoc_scaffold_1447_curated_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9196..10398
DNA (1203bp) protein (401aa)
Putative GntR family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUH4_9BURK
Putative GntR family transcriptional regulator {ECO:0000313|EMBL:EIK92864.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
GntR family transcriptional regulator
scnpilot_p_inoc_scaffold_1447_curated_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10400..11308
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUH3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK92863.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1447_curated_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11281..11889)
DNA (609bp) protein (203aa)
3'-5' exonuclease n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUH2_9BURK
3'-5' exonuclease {ECO:0000313|EMBL:EIK92862.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
3'-5' exonuclease
scnpilot_p_inoc_scaffold_1447_curated_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11940..14036
DNA (2097bp) protein (699aa)
UvrABC system protein B n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUH1_9BURK
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
excinuclease ABC subunit B
scnpilot_p_inoc_scaffold_1447_curated_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14289..14825
DNA (537bp) protein (179aa)
Transcriptional regulator IscR n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUH0_9BURK
Transcriptional regulator IscR {ECO:0000313|EMBL:EIK92860.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
BadM/Rrf2 family transcriptional regulator; K13643 Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
scnpilot_p_inoc_scaffold_1447_curated_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14902..16119
DNA (1218bp) protein (406aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00038344}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00063383};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
cysteine desulfurase IscS; K04487 cysteine desulfurase [EC:2.8.1.7]
Cysteine desulfurase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUG9_9BURK
scnpilot_p_inoc_scaffold_1447_curated_15
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16136..16522
DNA (387bp) protein (129aa)
NifU-like protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUG8_9BURK
NifU-like protein {ECO:0000313|EMBL:EIK92858.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
iscU; Fe-S cluster assembly protein; K04488 nitrogen fixation protein NifU and related proteins
scnpilot_p_inoc_scaffold_1447_curated_16
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16527..16850
DNA (324bp) protein (108aa)
Iron-sulfur cluster assembly protein IscA n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUG7_9BURK
Iron-sulfur cluster assembly protein IscA {ECO:0000313|EMBL:EIK92857.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
iron-sulfur cluster assembly protein IscA; K13628 iron-sulfur cluster assembly protein
scnpilot_p_inoc_scaffold_1447_curated_17
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16907..17425
DNA (519bp) protein (173aa)
Co-chaperone protein HscB homolog n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUG6_9BURK
Co-chaperone protein HscB homolog {ECO:0000256|HAMAP-Rule:MF_00682}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hscB; co-chaperone, DnaJ family; K04082 molecular chaperone HscB
scnpilot_p_inoc_scaffold_1447_curated_18
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17468..19342
DNA (1875bp) protein (625aa)
Chaperone protein HscA homolog n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUG5_9BURK
Chaperone protein HscA homolog {ECO:0000256|HAMAP-Rule:MF_00679}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hscA; chaperone protein HscA; K04044 molecular chaperone HscA
scnpilot_p_inoc_scaffold_1447_curated_19
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19356..19694
DNA (339bp) protein (113aa)
Ferredoxin, 2Fe-2S type, ISC system n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUG4_9BURK
Ferredoxin, 2Fe-2S type, ISC system {ECO:0000313|EMBL:EIK92854.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
ferredoxin, 2Fe-2S type, ISC system; K04755 ferredoxin, 2Fe-2S
scnpilot_p_inoc_scaffold_1447_curated_20
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19694..20401
DNA (708bp) protein (236aa)
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:EIK92853.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EIK92853.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
DNA polymerase iii, epsilon subunit (EC:2.7.7.7); K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7]
DNA polymerase III subunit epsilon n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUG3_9BURK
Displaying 20 items

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