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scnpilot_p_inoc_scaffold_3830_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_3830_curated_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..321
DNA (321bp) protein (107aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Trigger factor n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSH2_9BURK
trigger factor; K03545 trigger factor
scnpilot_p_inoc_scaffold_3830_curated_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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509..1126
DNA (618bp) protein (206aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSH1_9BURK
ATP-dependent Clp protease, proteolytic subunit ClpP
scnpilot_p_inoc_scaffold_3830_curated_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1237..2502
DNA (1266bp) protein (422aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSH0_9BURK
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
clpX; ATP-dependent protease ATP-binding subunit ClpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX
scnpilot_p_inoc_scaffold_3830_curated_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2602..5034
DNA (2433bp) protein (811aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
ATP-dependent protease La (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53]
Lon protease n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSG9_9BURK
scnpilot_p_inoc_scaffold_3830_curated_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5442..7136)
DNA (1695bp) protein (565aa)
butyryl-CoA dehydrogenase (EC:1.3.99.2)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNK7_9BURK
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:EIK90797.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_3830_curated_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7197..7925)
DNA (729bp) protein (243aa)
ABC transporter-like protein {ECO:0000313|EMBL:EIK90798.1}; EC=3.6.1.3 {ECO:0000313|EMBL:EIK90798.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
ABC transporter-like protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNK8_9BURK
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein
scnpilot_p_inoc_scaffold_3830_curated_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7927..9708)
DNA (1782bp) protein (594aa)
ABC transporter-like protein {ECO:0000313|EMBL:EIK90799.1}; EC=3.6.1.3 {ECO:0000313|EMBL:EIK90799.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
ABC transporter-like protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNK9_9BURK
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein; K01998 branched-chain amino acid transport system permease protein
scnpilot_p_inoc_scaffold_3830_curated_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9710..10747)
DNA (1038bp) protein (346aa)
Inner-membrane translocator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNL0_9BURK
Inner-membrane translocator {ECO:0000313|EMBL:EIK90800.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
scnpilot_p_inoc_scaffold_3830_curated_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10899..12038)
DNA (1140bp) protein (380aa)
Extracellular ligand-binding receptor n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNL1_9BURK
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EIK90801.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein
scnpilot_p_inoc_scaffold_3830_curated_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12101..13348)
DNA (1248bp) protein (416aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EIK90802.1}; EC=2.3.1.16 {ECO:0000313|EMBL:EIK90802.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA acetyltransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNL2_9BURK
scnpilot_p_inoc_scaffold_3830_curated_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13345..13524)
DNA (180bp) protein (60aa)
Feruloyl-CoA synthase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNL3_9BURK
Feruloyl-CoA synthase {ECO:0000313|EMBL:EIK90803.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
feruloyl-CoA synthase
Displaying 11 items

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