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scnpilot_p_inoc_scaffold_1611_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1611_curated_1
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..736)
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI000362366B
Integrase {ECO:0000313|EMBL:KGH12945.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
phage integrase
scnpilot_p_inoc_scaffold_1611_curated_2
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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1103..1651
DNA (549bp) protein (183aa)
Cytochrome B561 n=2 Tax=Pseudomonas aeruginosa RepID=U5AHE9_PSEAI
cytochrome b561
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
scnpilot_p_inoc_scaffold_1611_curated_3
Loktanella vestfoldensis, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1744..2136
DNA (393bp) protein (131aa)
Tautomerase, putative n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V5S4_9RHOB
Tautomerase, putative {ECO:0000313|EMBL:EAQ06248.1}; TaxID=314232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella vestfoldensis SKA53.;"
Tautomerase
scnpilot_p_inoc_scaffold_1611_curated_4
R_Alphaproteobacteria_63_12, Alphaproteobacteria, Proteobacteria, Bacteria

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2231..2635
DNA (405bp) protein (135aa)
Ketosteroid isomerase-like protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XW8_SOLUE
ketosteroid isomerase-like protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
scnpilot_p_inoc_scaffold_1611_curated_5
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2668..3396)
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI00037E1F9F
Uncharacterized protein {ECO:0000313|EMBL:KJC52768.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
Crp family transcriptional regulator
scnpilot_p_inoc_scaffold_1611_curated_6
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3421..5109)
DNA (1689bp) protein (563aa)
acyl-CoA dehydrogenase type 2; K16047 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase subunit HsaA [EC:1.14.14.12]
monooxygenase n=1 Tax=Salinispora pacifica RepID=UPI0003720741
Acyl-CoA dehydrogenase, C-terminal domain protein {ECO:0000313|EMBL:KCB36944.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 8-296-03.;"
scnpilot_p_inoc_scaffold_1611_curated_7
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5288..6478
DNA (1191bp) protein (397aa)
ABC transporter, substrate-binding protein (Fragment) n=1 Tax=Bordetella avium (strain 197N) RepID=Q2L309_BORA1
Uncharacterized protein {ECO:0000313|EMBL:KJC52766.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
ABC transporter substrate-binding protein
scnpilot_p_inoc_scaffold_1611_curated_8
Candidatus Accumulibacter sp. SK-01, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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6482..7525
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI00037E4EC1
LIV-I protein H {ECO:0000313|EMBL:KFB69338.1}; TaxID=1457154 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-01.;"
ABC transporter ATPase
scnpilot_p_inoc_scaffold_1611_curated_9
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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7515..9275
DNA (1761bp) protein (587aa)
ABC transporter related protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CQL6_TRURR
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein; K01998 branched-chain amino acid transport system permease protein
ABC transporter related protein {ECO:0000313|EMBL:ADI15000.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
scnpilot_p_inoc_scaffold_1611_curated_10
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9269..9994
DNA (726bp) protein (242aa)
ABC branched-chain amino acid family transporter, ATPase subunit n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LH55_BURGS
Metal-dependent hydrolase {ECO:0000313|EMBL:KGE08891.1}; TaxID=28095 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (Pseudomonas marginata) (Phytomonas marginata).;"
ABC branched-chain amino acid family transporter, ATPase subunit; K01996 branched-chain amino acid transport system ATP-binding protein
scnpilot_p_inoc_scaffold_1611_curated_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9987..11579
DNA (1593bp) protein (531aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002F658B8
Uncharacterized protein {ECO:0000313|EMBL:KIZ40058.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
exoenzyme regulatory protein AepA; K07047
scnpilot_p_inoc_scaffold_1611_curated_12
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11703..12224
DNA (522bp) protein (174aa)
GCN5 family acetyltransferase n=1 Tax=Chryseobacterium taeanense RepID=UPI000368E695
Uncharacterized protein {ECO:0000313|EMBL:EXU81566.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1877.;"
GCN5-like N-acetyltransferase
scnpilot_p_inoc_scaffold_1611_curated_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(12229..13362)
DNA (1134bp) protein (378aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037A7C60
ABC transporter
ABC transporter {ECO:0000313|EMBL:AFU45598.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_1611_curated_14
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13359..14543)
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00035DF1B4
ABC transporter
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
scnpilot_p_inoc_scaffold_1611_curated_15
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14560..15537)
DNA (978bp) protein (326aa)
secretion protein HlyD n=1 Tax=Variovorax paradoxus RepID=UPI000375EFFF
secretion protein HlyD family protein
Secretion protein HlyD family protein {ECO:0000313|EMBL:AFU45600.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_1611_curated_16
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(15539..16993)
DNA (1455bp) protein (485aa)
Outer membrane protein n=1 Tax=Acidovorax sp. CF316 RepID=J0KUX3_9BURK
Outer membrane protein {ECO:0000313|EMBL:EJE54938.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
outer membrane efflux protein
scnpilot_p_inoc_scaffold_1611_curated_17
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17083..18114)
DNA (1032bp) protein (344aa)
Beta lactamase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPE5_9BURK
Beta lactamase {ECO:0000313|EMBL:EIK91085.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Cephalosporinase
Displaying 17 items

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