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scnpilot_p_inoc_scaffold_1319_curated

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1319_curated_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..1146
DNA (1146bp) protein (382aa)
Putative sigma factor n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIL0_9BURK
Putative sigma factor {ECO:0000313|EMBL:EIK89050.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
RNA polymerase ECF-subfamily sigma factor
scnpilot_p_inoc_scaffold_1319_curated_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1190..1735
DNA (546bp) protein (182aa)
PA-phosphatase-like phosphoesterase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIL1_9BURK
PA-phosphatase-like phosphoesterase {ECO:0000313|EMBL:EIK89051.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
putative phosphoesterase, PAP2 superfamily
scnpilot_p_inoc_scaffold_1319_curated_3
unknown

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comp(1744..2805)
DNA (1062bp) protein (354aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1319_curated_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3010..4215
DNA (1206bp) protein (402aa)
Flavin-containing monooxygenase FMO n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIL2_9BURK
Flavin-containing monooxygenase FMO {ECO:0000313|EMBL:EIK89052.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
flavin-containing monooxygenase FMO
scnpilot_p_inoc_scaffold_1319_curated_5
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4207..5100)
DNA (894bp) protein (298aa)
Transcriptional regulator, LysR family n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNH1_RUBGI
LysR family transcriptional regulator
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
scnpilot_p_inoc_scaffold_1319_curated_6
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5245..6213
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B2AHS1_CUPTR
Uncharacterized protein {ECO:0000313|EMBL:KDB50707.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1319_curated_7
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6309..7082
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002EEC03E
short-chain dehydrogenase/reductase SDR
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
scnpilot_p_inoc_scaffold_1319_curated_8
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7131..8795
DNA (1665bp) protein (555aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00030B6B38
AMP-dependent synthetase and ligase
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
scnpilot_p_inoc_scaffold_1319_curated_9
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8816..9658
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00030B2E20
Uncharacterized protein {ECO:0000313|EMBL:CDM23209.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
amidohydrolase 2; K07045
scnpilot_p_inoc_scaffold_1319_curated_10
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9661..10875
DNA (1215bp) protein (405aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI000361B4B8
beta-ketoadipyl CoA thiolase
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
scnpilot_p_inoc_scaffold_1319_curated_11
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10872..11678
DNA (807bp) protein (269aa)
enoyl-CoA hydratase/isomerase; K15866 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
Enoyl-CoA hydratase/isomerase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y5K6_LEPCP
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ACB34718.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
scnpilot_p_inoc_scaffold_1319_curated_12
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11675..12457
DNA (783bp) protein (261aa)
Enoyl-CoA hydratase n=1 Tax=Azoarcus sp. KH32C RepID=H0Q204_9RHOO
enoyl-CoA hydratase
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
scnpilot_p_inoc_scaffold_1319_curated_13
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12510..13490
DNA (981bp) protein (327aa)
Candidate extracytoplasmic binding receptor n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XWR1_RAMTT
tctC; extracytoplasmic binding receptor
Candidate extracytoplasmic binding receptor {ECO:0000313|EMBL:AEG94205.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
scnpilot_p_inoc_scaffold_1319_curated_14
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13544..14857
DNA (1314bp) protein (438aa)
Arylsulfatase-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XWR3_RAMTT
arylsulfatase
Arylsulfatase-like protein {ECO:0000313|EMBL:AEG94207.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
scnpilot_p_inoc_scaffold_1319_curated_15
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15017..15298
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIL3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89053.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1319_curated_16
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15301..16497
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIL4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89054.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1319_curated_17
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16529..17548
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIL5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89055.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
methyltransferase
scnpilot_p_inoc_scaffold_1319_curated_18
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17649..18308
DNA (660bp) protein (220aa)
TetR family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIL6_9BURK
TetR family transcriptional regulator {ECO:0000313|EMBL:EIK89056.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
TetR family transcriptional regulator
scnpilot_p_inoc_scaffold_1319_curated_19
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18305..19273
DNA (969bp) protein (323aa)
Short-chain dehydrogenase reductase sdr {ECO:0000313|EMBL:EIK89057.1}; EC=1.3.1.38 {ECO:0000313|EMBL:EIK89057.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Short-chain dehydrogenase reductase sdr n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIL7_9BURK
putative oxidoreductase, SDR family
scnpilot_p_inoc_scaffold_1319_curated_20
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19270..20883
DNA (1614bp) protein (538aa)
Propionyl-CoA carboxylase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIL8_9BURK
Propionyl-CoA carboxylase {ECO:0000313|EMBL:EIK89058.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
carboxyl transferase
scnpilot_p_inoc_scaffold_1319_curated_21
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20917..22092
DNA (1176bp) protein (392aa)
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:EIK89059.1}; EC=1.3.8.- {ECO:0000313|EMBL:EIK89059.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Acyl-CoA dehydrogenase domain protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIL9_9BURK
acyl-CoA dehydrogenase domain-containing protein
scnpilot_p_inoc_scaffold_1319_curated_22
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22197..22997
DNA (801bp) protein (267aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIM0_9BURK
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:EIK89060.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
enoyl-CoA hydratase/isomerase
scnpilot_p_inoc_scaffold_1319_curated_23
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22994..24922
DNA (1929bp) protein (643aa)
Carbamoyl-phosphate synthase L chain, ATP-binding protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIM1_9BURK
Carbamoyl-phosphate synthase L chain, ATP-binding protein {ECO:0000313|EMBL:EIK89061.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
carbamoyl-phosphate synthase ATP-binding subunit L
scnpilot_p_inoc_scaffold_1319_curated_24
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24919..26067
DNA (1149bp) protein (383aa)
AcyL-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:EIK89062.1}; EC=1.3.8.- {ECO:0000313|EMBL:EIK89062.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
acyl-CoA dehydrogenase-like protein; K00249 acyl-CoA dehydrogenase [EC:1.3.99.3]
AcyL-CoA dehydrogenase domain-containing protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIM2_9BURK
scnpilot_p_inoc_scaffold_1319_curated_25
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26094..26453
DNA (360bp) protein (120aa)
Thioesterase superfamily protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIM3_9BURK
Thioesterase superfamily protein {ECO:0000313|EMBL:EIK89063.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
PHAE protein
Displaying 25 items

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