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scnpilot_p_inoc_scaffold_2089_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2089_curated_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(934..2709)
DNA (1776bp) protein (592aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MI86_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK88926.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2089_curated_2
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2719..3615)
DNA (897bp) protein (299aa)
UPI0003CF7EB6 related cluster n=1 Tax=unknown RepID=UPI0003CF7EB6
Uncharacterized protein {ECO:0000313|EMBL:AHY50188.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2089_curated_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4009..4794
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MI87_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK88927.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2089_curated_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4808..5701)
DNA (894bp) protein (298aa)
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:EIK88928.1}; EC=1.1.1.31 {ECO:0000313|EMBL:EIK88928.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60); K00042 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
2-hydroxy-3-oxopropionate reductase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MI88_9BURK
scnpilot_p_inoc_scaffold_2089_curated_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5757..6893)
DNA (1137bp) protein (379aa)
Twitching motility protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MI89_9BURK
Twitching motility protein {ECO:0000313|EMBL:EIK88929.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
twitching motility protein; K02670 twitching motility protein PilU
scnpilot_p_inoc_scaffold_2089_curated_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6919..7962)
DNA (1044bp) protein (348aa)
Twitching motility protein {ECO:0000313|EMBL:EIK88930.1}; EC=3.6.1.15 {ECO:0000313|EMBL:EIK88930.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Twitching motility protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MI90_9BURK
twitching motility protein; K02669 twitching motility protein PilT
scnpilot_p_inoc_scaffold_2089_curated_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8004..8726
DNA (723bp) protein (241aa)
Alanine racemase domain-containing protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MI91_9BURK
Alanine racemase domain-containing protein {ECO:0000313|EMBL:EIK88931.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
alanine racemase domain-containing protein; K06997
scnpilot_p_inoc_scaffold_2089_curated_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8841..9311)
DNA (471bp) protein (157aa)
AsnC family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MI93_9BURK
AsnC family transcriptional regulator {ECO:0000313|EMBL:EIK88933.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
transcriptional regulator, AsnC family
scnpilot_p_inoc_scaffold_2089_curated_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9374..12406
DNA (3033bp) protein (1011aa)
Bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:EIK88934.1}; EC=1.2.1.88 {ECO:0000313|EMBL:EIK88934.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
putA; bifunctional putA protein : proline dehydrogenase, delta-1-pyrroline-5-carboxylate dehydrogenase; K13821 proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.99.8 1.5.1.12]
Bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MI94_9BURK
scnpilot_p_inoc_scaffold_2089_curated_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12480..13835
DNA (1356bp) protein (452aa)
Glutamine synthetase {ECO:0000313|EMBL:EIK88935.1}; EC=6.3.1.2 {ECO:0000313|EMBL:EIK88935.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
glutamine synthetase (EC:6.3.1.2); K01915 glutamine synthetase [EC:6.3.1.2] rbh
Glutamine synthetase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MI95_9BURK
scnpilot_p_inoc_scaffold_2089_curated_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13851..16787)
DNA (2937bp) protein (979aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MI96_9BURK
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:EIK88936.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
diguanylate cyclase/phosphodiesterase
scnpilot_p_inoc_scaffold_2089_curated_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16982..17338
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MI97_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK88937.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2089_curated_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17374..19185
DNA (1812bp) protein (604aa)
Propionyl-CoA carboxylase {ECO:0000313|EMBL:EIK88938.1}; EC=6.4.1.3 {ECO:0000313|EMBL:EIK88938.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
propionyl-CoA carboxylase (EC:6.4.1.3)
Propionyl-CoA carboxylase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MI98_9BURK
scnpilot_p_inoc_scaffold_2089_curated_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19193..19678)
DNA (486bp) protein (162aa)
Response regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MI99_9BURK
Response regulator {ECO:0000313|EMBL:EIK88939.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
response regulator receiver protein
scnpilot_p_inoc_scaffold_2089_curated_15
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19675..20988)
DNA (1314bp) protein (438aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Multi-sensor signal transduction histidine kinase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIA0_9BURK
aphA; Cyanobacterial phytochrome A
Displaying 15 items

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