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scnpilot_p_inoc_scaffold_854_curated

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Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_854_curated_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..560
DNA (558bp) protein (186aa)
Cytochrome c biogenesis protein transmembrane subunit n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MM54_9BURK
Cytochrome c biogenesis protein transmembrane subunit {ECO:0000313|EMBL:EIK90294.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
thiol-disulfide interchange protein DsbD-like protein
scnpilot_p_inoc_scaffold_854_curated_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1225..2328
DNA (1104bp) protein (368aa)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hemE; uroporphyrinogen decarboxylase; K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37]
Uroporphyrinogen decarboxylase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MLV4_9BURK
scnpilot_p_inoc_scaffold_854_curated_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2732..4795
DNA (2064bp) protein (688aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
priA; primosomal protein N; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-]
Primosomal protein N n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MLV3_9BURK
scnpilot_p_inoc_scaffold_854_curated_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4855..5268)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MLV2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK90192.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_854_curated_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5265..5765)
DNA (501bp) protein (167aa)
Putative GAF sensor protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MLV1_9BURK
Putative GAF sensor protein {ECO:0000313|EMBL:EIK90191.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
GAF sensor protein
scnpilot_p_inoc_scaffold_854_curated_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5934..8093)
DNA (2160bp) protein (720aa)
Catalase-peroxidase {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451}; Short=CP {ECO:0000256|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451};; Peroxidase/catalase {ECO:0000256|HAMAP-Rule:MF_01961}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
catalase/peroxidase HPI; K03782 catalase-peroxidase [EC:1.11.1.21]
Catalase-peroxidase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MLV0_9BURK
scnpilot_p_inoc_scaffold_854_curated_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8409..9371)
DNA (963bp) protein (321aa)
Auxin efflux carrier n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MLU9_9BURK
Auxin efflux carrier {ECO:0000313|EMBL:EIK90189.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
auxin efflux carrier
scnpilot_p_inoc_scaffold_854_curated_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9442..11532
DNA (2091bp) protein (697aa)
ATP-dependent DNA helicase Rep {ECO:0000256|HAMAP-Rule:MF_01920}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01920, ECO:0000256|SAAS:SAAS00145970};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
rep; ATP-dependent DNA helicase; K03656 ATP-dependent DNA helicase Rep [EC:3.6.4.12]
UvrD/REP helicase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MLU8_9BURK
scnpilot_p_inoc_scaffold_854_curated_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11532..11996
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MLU7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK90187.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_854_curated_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12028..13371)
DNA (1344bp) protein (448aa)
Glutamate dehydrogenase {ECO:0000313|EMBL:EIK92204.1}; EC=1.4.1.4 {ECO:0000313|EMBL:EIK92204.1};; Flags: Fragment;; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
glutamate dehydrogenase (EC:1.4.1.4)
Glutamate dehydrogenase (Fragment) n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSL4_9BURK
scnpilot_p_inoc_scaffold_854_curated_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13548..14459)
DNA (912bp) protein (304aa)
LysR family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSL5_9BURK
LysR family transcriptional regulator {ECO:0000313|EMBL:EIK92205.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
transcriptional regulator, LysR family
scnpilot_p_inoc_scaffold_854_curated_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14620..15858
DNA (1239bp) protein (413aa)
FAD dependent oxidoreductase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSL6_9BURK
FAD dependent oxidoreductase {ECO:0000313|EMBL:EIK92206.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
FAD-dependent oxidoreductase
scnpilot_p_inoc_scaffold_854_curated_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15867..17822
DNA (1956bp) protein (652aa)
N-methylhydantoinase A n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSL7_9BURK
N-methylhydantoinase A {ECO:0000313|EMBL:EIK92207.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
putative hydantoinase B/oxoprolinase
scnpilot_p_inoc_scaffold_854_curated_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17819..19399
DNA (1581bp) protein (527aa)
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSL8_9BURK
5-oxoprolinase (ATP-hydrolyzing) {ECO:0000313|EMBL:EIK92208.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
putative hydantoinase B/oxoprolinase
scnpilot_p_inoc_scaffold_854_curated_15
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19428..20432
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSL9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK92209.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
putative Bug-like extra-cytoplasmic solute receptor, TTT family
scnpilot_p_inoc_scaffold_854_curated_16
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20446..20847
DNA (402bp) protein (134aa)
Putative endoribonuclease L-PSP n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSM0_9BURK
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:EIK92210.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
putative endoribonuclease L-PSP
scnpilot_p_inoc_scaffold_854_curated_17
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20893..21534
DNA (642bp) protein (214aa)
TetR family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSM2_9BURK
TetR family transcriptional regulator {ECO:0000313|EMBL:EIK92212.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
transcriptional regulator, TetR family
scnpilot_p_inoc_scaffold_854_curated_18
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21642..22649
DNA (1008bp) protein (336aa)
ferredoxin; K03863 vanillate monooxygenase [EC:1.14.13.82]
Vanillate O-demethylase oxidoreductase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSM3_9BURK
Vanillate O-demethylase oxidoreductase {ECO:0000313|EMBL:EIK92213.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_854_curated_19
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22671..23999
DNA (1329bp) protein (443aa)
Amidohydrolase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSM4_9BURK
Amidohydrolase {ECO:0000313|EMBL:EIK92214.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
putative amidohydrolase
scnpilot_p_inoc_scaffold_854_curated_20
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24028..24888
DNA (861bp) protein (287aa)
Creatininase; K01470 creatinine amidohydrolase [EC:3.5.2.10]
Creatininase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSM5_9BURK
Creatininase {ECO:0000313|EMBL:EIK92215.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_854_curated_21
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24939..25937
DNA (999bp) protein (333aa)
NMT1/THI5 like domain protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSM6_9BURK
NMT1/THI5 like domain protein {ECO:0000313|EMBL:EIK92216.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
nmt1/thi5 like domain-containing protein
scnpilot_p_inoc_scaffold_854_curated_22
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26012..26839
DNA (828bp) protein (276aa)
ABC transporter {ECO:0000313|EMBL:EIK92217.1}; EC=3.6.1.3 {ECO:0000313|EMBL:EIK92217.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
ABC transporter n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSM7_9BURK
ABC transporter
scnpilot_p_inoc_scaffold_854_curated_23
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26836..27645
DNA (810bp) protein (270aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSM8_9BURK
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EIK92218.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
binding-protein-dependent transport systems inner membrane component; K02050 NitT/TauT family transport system permease protein
scnpilot_p_inoc_scaffold_854_curated_24
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27755..29104
DNA (1350bp) protein (450aa)
FAD linked oxidase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSM9_9BURK
FAD linked oxidase {ECO:0000313|EMBL:EIK92219.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
FAD-binding domain-containing protein
scnpilot_p_inoc_scaffold_854_curated_25
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29119..29574
DNA (456bp) protein (152aa)
Endoribonuclease L-PSP n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSN0_9BURK
Endoribonuclease L-PSP {ECO:0000313|EMBL:EIK92220.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
endoribonuclease L-PSP
scnpilot_p_inoc_scaffold_854_curated_26
Pectobacterium betavasculorum, Pectobacterium, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29799..30629
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Treponema primitia RepID=UPI00025554D8
Uncharacterized protein {ECO:0000313|EMBL:KFX07280.1}; TaxID=55207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" source="Pectobacterium betavasculorum.;"
hypothetical protein
scnpilot_p_inoc_scaffold_854_curated_27
unknown

Not on your lists

comp(30651..30815)
DNA (165bp) protein (55aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_854_curated_28
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30860..31909)
DNA (1050bp) protein (350aa)
Acyltransferase 3 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSN1_9BURK
Acyltransferase 3 {ECO:0000313|EMBL:EIK92221.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
acyltransferase 3
scnpilot_p_inoc_scaffold_854_curated_29
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33182..34573
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12C76_POLSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE43866.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
scnpilot_p_inoc_scaffold_854_curated_30
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34575..35735
DNA (1161bp) protein (387aa)
Transcriptional regulator, XRE family n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12C77_POLSJ
hypothetical protein
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABE43865.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
Displaying items 1-30 of 32 in total

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