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scnpilot_p_inoc_scaffold_5005_curated

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_5005_curated_1
unknown

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1..69
DNA (69bp) protein (23aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_5005_curated_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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66..1346
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIS0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89110.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
GK24882 gene product from transcript GK24882-RA
scnpilot_p_inoc_scaffold_5005_curated_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1473..2030
DNA (558bp) protein (186aa)
Flagellar basal body-associated protein flil n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIR9_9BURK
Flagellar basal body-associated protein flil {ECO:0000313|EMBL:EIK89109.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
flagellar basal body-associated protein FliL; K02415 flagellar FliL protein
scnpilot_p_inoc_scaffold_5005_curated_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2049..3053
DNA (1005bp) protein (335aa)
Flagellar motor switch protein FliM n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIR8_9BURK
Flagellar motor switch protein FliM {ECO:0000313|EMBL:EIK89108.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
flagellar motor switch protein FliM; K02416 flagellar motor switch protein FliM
scnpilot_p_inoc_scaffold_5005_curated_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3073..3492
DNA (420bp) protein (140aa)
Flagellar motor switch protein flin n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIR7_9BURK
Flagellar motor switch protein flin {ECO:0000313|EMBL:EIK89107.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
fliN; flagellar motor switch protein; K02417 flagellar motor switch protein FliN/FliY
scnpilot_p_inoc_scaffold_5005_curated_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3610..3981
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIR6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89106.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
flagellar biosynthesis protein FliO; K02418 flagellar protein FliO/FliZ
scnpilot_p_inoc_scaffold_5005_curated_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3968..4759
DNA (792bp) protein (264aa)
Flagellar biosynthetic protein FliP {ECO:0000313|EMBL:EIK89105.1}; EC=3.1.1.3 {ECO:0000313|EMBL:EIK89105.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
fliP; flagellar biosynthesis protein flip (EC:3.1.1.3); K02419 flagellar biosynthetic protein FliP
Flagellar biosynthetic protein FliP n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIR5_9BURK
scnpilot_p_inoc_scaffold_5005_curated_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4768..5037
DNA (270bp) protein (90aa)
Flagellar biosynthetic protein FliQ n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIR4_9BURK
Flagellar biosynthetic protein FliQ {ECO:0000313|EMBL:EIK89104.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
flagellar biosynthetic protein FliQ; K02420 flagellar biosynthetic protein FliQ
scnpilot_p_inoc_scaffold_5005_curated_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5145..5909
DNA (765bp) protein (255aa)
Flagellar biosynthetic protein FliR n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIR3_9BURK
Flagellar biosynthetic protein fliR {ECO:0000256|RuleBase:RU003842}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
flagellar biosynthetic protein FliR; K02421 flagellar biosynthetic protein FliR
scnpilot_p_inoc_scaffold_5005_curated_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6015..6626
DNA (612bp) protein (204aa)
Transcription regulator protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIR2_9BURK
Transcription regulator protein {ECO:0000313|EMBL:EIK89102.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Transcriptional regulator, TetR family
scnpilot_p_inoc_scaffold_5005_curated_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6704..7402
DNA (699bp) protein (233aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIR1_9BURK
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EIK89101.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Short-chain dehydrogenase/reductase SDR
scnpilot_p_inoc_scaffold_5005_curated_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7405..8802
DNA (1398bp) protein (466aa)
MATE efflux family protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIR0_9BURK
MATE efflux family protein {ECO:0000313|EMBL:EIK89100.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
MATE efflux family protein
scnpilot_p_inoc_scaffold_5005_curated_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8818..9258)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIQ9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89099.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_5005_curated_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9255..9884)
DNA (630bp) protein (210aa)
LuxR family two component transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIQ7_9BURK
LuxR family two component transcriptional regulator {ECO:0000313|EMBL:EIK89097.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
two component LuxR family transcriptional regulator
scnpilot_p_inoc_scaffold_5005_curated_15
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9862..11016)
DNA (1155bp) protein (385aa)
Response regulator receiver sensor signal transduction histidine kinase {ECO:0000313|EMBL:EIK89096.1}; EC=2.7.13.3 {ECO:0000313|EMBL:EIK89096.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Response regulator receiver sensor signal transduction histidine kinase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIQ6_9BURK
response regulator receiver sensor signal transduction histidine kinase
scnpilot_p_inoc_scaffold_5005_curated_16
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11183..11626
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIQ5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89095.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_5005_curated_17
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11674..12036
DNA (363bp) protein (121aa)
Response regulator receiver n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIQ4_9BURK
Response regulator receiver {ECO:0000313|EMBL:EIK89094.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
response regulator receiver protein
scnpilot_p_inoc_scaffold_5005_curated_18
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12148..13215
DNA (1068bp) protein (356aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
CheA signal transduction histidine kinase; K03407 two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
CheA signal transduction histidine kinase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MIQ3_9BURK
Displaying 18 items

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