ggKbase home page

scnpilot_p_inoc_scaffold_1709_curated

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1709_curated_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..782)
DNA (780bp) protein (260aa)
AMP nucleosidase {ECO:0000256|HAMAP-Rule:MF_01932}; EC=3.2.2.4 {ECO:0000256|HAMAP-Rule:MF_01932};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
AMP nucleosidase (EC:3.2.2.4); K01241 AMP nucleosidase [EC:3.2.2.4]
AMP nucleosidase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQI6_9BURK
scnpilot_p_inoc_scaffold_1709_curated_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

797..2071
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQI7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91477.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1709_curated_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2106..3509)
DNA (1404bp) protein (468aa)
Pyridine nucleotide-disulfide oxidoreductase dimerization region {ECO:0000313|EMBL:EIK91479.1}; EC=1.8.1.7 {ECO:0000313|EMBL:EIK91479.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
pyridine nucleotide-disulfide oxidoreductase dimerisation region; K00383 glutathione reductase (NADPH) [EC:1.8.1.7]
Pyridine nucleotide-disulfide oxidoreductase dimerization region n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQI9_9BURK
scnpilot_p_inoc_scaffold_1709_curated_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3560..4417)
DNA (858bp) protein (286aa)
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:EIK91483.1}; EC=1.1.1.157 {ECO:0000313|EMBL:EIK91483.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hbd; 3-hydroxybutyryl-CoA dehydrogenase Hbd (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQJ3_9BURK
scnpilot_p_inoc_scaffold_1709_curated_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4580..6310
DNA (1731bp) protein (577aa)
Choline dehydrogenase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQJ4_9BURK
Choline dehydrogenase {ECO:0000313|EMBL:EIK91484.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
choline dehydrogenase
scnpilot_p_inoc_scaffold_1709_curated_6
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6255..6554
DNA (300bp) protein (100aa)
antibiotic biosynthesis monooxygenase; K07145 id=5080635 bin=GWF1_Burkholderiales_GWF1_66_17 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
Antibiotic biosynthesis monooxygenase
Tax=BJP_08E140C01_Burkholderiales_65_30
scnpilot_p_inoc_scaffold_1709_curated_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6636..7571)
DNA (936bp) protein (312aa)
Arginase {ECO:0000256|RuleBase:RU361159}; EC=3.5.3.1 {ECO:0000256|RuleBase:RU361159};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
rocF; arginase (EC:3.5.3.1); K01476 arginase [EC:3.5.3.1]
Arginase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQJ5_9BURK
scnpilot_p_inoc_scaffold_1709_curated_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7697..8971
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQJ6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91486.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
parallel beta-helix repeat-containing protein
scnpilot_p_inoc_scaffold_1709_curated_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8972..9865)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQJ8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91488.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein; K07029
scnpilot_p_inoc_scaffold_1709_curated_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9879..13172)
DNA (3294bp) protein (1098aa)
Methylmalonyl-CoA mutase large subunit {ECO:0000313|EMBL:EIK91489.1}; EC=5.4.99.2 {ECO:0000313|EMBL:EIK91489.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
methylmalonyl-CoA mutase; K11942 methylmalonyl-CoA mutase [EC:5.4.99.2]
Methylmalonyl-CoA mutase large subunit n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQJ9_9BURK
scnpilot_p_inoc_scaffold_1709_curated_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13195..14076)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQK0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91490.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1709_curated_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14210..16213)
DNA (2004bp) protein (668aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQK1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91491.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1709_curated_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16213..16833)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQK2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91492.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1709_curated_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16898..17326)
DNA (429bp) protein (143aa)
Family 7 extracellular solute-binding protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQK3_9BURK
Family 7 extracellular solute-binding protein {ECO:0000313|EMBL:EIK91493.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
putative TRAP dicarboxylate transporter, subunit DctP
Displaying 14 items

View Taxonomy