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scnpilot_p_inoc_scaffold_1660_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1660_curated_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(128..1558)
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUI3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK92873.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1660_curated_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1617..2939
DNA (1323bp) protein (441aa)
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:EIK92874.1}; EC=1.1.1.22 {ECO:0000313|EMBL:EIK92874.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
UDP-glucose/GDP-mannose dehydrogenase; K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22]
Nucleotide sugar dehydrogenase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUI4_9BURK
scnpilot_p_inoc_scaffold_1660_curated_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2943..3539)
DNA (597bp) protein (199aa)
Chromate transporter n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUI5_9BURK
Chromate transporter {ECO:0000313|EMBL:EIK92875.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Chromate transporter; K07240 chromate transporter
scnpilot_p_inoc_scaffold_1660_curated_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3544..4131)
DNA (588bp) protein (196aa)
Chromate transporter n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUI6_9BURK
Chromate transporter {ECO:0000313|EMBL:EIK92876.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
chrA; chromate transport protein, half length; K07240 chromate transporter
scnpilot_p_inoc_scaffold_1660_curated_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4124..4513)
DNA (390bp) protein (130aa)
Response regulator receiver n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUI7_9BURK
Response regulator receiver {ECO:0000313|EMBL:EIK92877.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
response regulator receiver
scnpilot_p_inoc_scaffold_1660_curated_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4526..5767)
DNA (1242bp) protein (414aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Histidine kinase response regulator hybrid protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUI8_9BURK
GAF sensor signal transduction histidine kinase
scnpilot_p_inoc_scaffold_1660_curated_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5900..6643)
DNA (744bp) protein (248aa)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:EIK92879.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EIK92879.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
3-oxoacyl-(acyl-carrier-protein) reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUI9_9BURK
scnpilot_p_inoc_scaffold_1660_curated_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6655..8796)
DNA (2142bp) protein (714aa)
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:EIK92880.1}; EC=4.2.1.17 {ECO:0000313|EMBL:EIK92880.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUJ0_9BURK
3-hydroxyacyl-CoA dehydrogenase
scnpilot_p_inoc_scaffold_1660_curated_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8801..10006)
DNA (1206bp) protein (402aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EIK92881.1}; EC=2.3.1.16 {ECO:0000313|EMBL:EIK92881.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA acetyltransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUJ1_9BURK
scnpilot_p_inoc_scaffold_1660_curated_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10170..11333
DNA (1164bp) protein (388aa)
Acyl-CoA dehydrogenase-like protein {ECO:0000313|EMBL:EIK92882.1}; EC=1.3.8.8 {ECO:0000313|EMBL:EIK92882.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Acyl-CoA dehydrogenase-like protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUJ2_9BURK
similar to acyl-Coenzyme A dehydrogenase, long chain
scnpilot_p_inoc_scaffold_1660_curated_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11421..12374
DNA (954bp) protein (318aa)
Putative nodulation-related LysR family regulatory protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUJ3_9BURK
Putative nodulation-related LysR family regulatory protein {ECO:0000313|EMBL:EIK92883.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
transcriptional activator for leuABCD operon
scnpilot_p_inoc_scaffold_1660_curated_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12428..13357
DNA (930bp) protein (310aa)
LysR family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUJ4_9BURK
LysR family transcriptional regulator {ECO:0000313|EMBL:EIK92884.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
regulatory protein, LysR:LysR, substrate-binding protein
scnpilot_p_inoc_scaffold_1660_curated_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13382..13717)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUJ5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK92885.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_1660_curated_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13919..14545)
DNA (627bp) protein (209aa)
ABC transporter-like protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUJ6_9BURK
ABC transporter-like protein {ECO:0000313|EMBL:EIK92886.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
ABC transporter-like protein
scnpilot_p_inoc_scaffold_1660_curated_15
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14552..14809)
DNA (258bp) protein (86aa)
Uncharacterized protein (Fragment) n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUJ7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK92887.1}; Flags: Fragment;; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein; K02451 general secretion pathway protein B
scnpilot_p_inoc_scaffold_1660_curated_16
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15360..17084)
DNA (1725bp) protein (575aa)
gspA; general secretion pathway protein A; K02450 general secretion pathway protein A id=5082691 bin=GWF1_Burkholderiales_GWF1_66_17 species=Methylibium petroleiphilum genus=Methylibium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
peptidoglycan-binding domain-containing protein; K02450 general secretion pathway protein A
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
scnpilot_p_inoc_scaffold_1660_curated_17
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17136..17696)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGQ3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK88393.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
Displaying 17 items

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