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scnpilot_p_inoc_scaffold_1780_curated_20

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(21418..21942)

Top 3 Functional Annotations

Value Algorithm Source
Tetratricopeptide TPR_3 repeat-containing protein (Fragment) n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F972_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 30.9
  • Coverage: 149.0
  • Bit_score: 69
  • Evalue 3.90e-09
Tetratricopeptide TPR_3 repeat-containing protein {ECO:0000313|EMBL:EHS50652.1}; Flags: Fragment;; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.9
  • Coverage: 149.0
  • Bit_score: 69
  • Evalue 5.50e-09

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Taxonomy

Rhizobium sp. PDO1-076 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 525
ATGATCGATTCGCTCCCCGTCCACCCCGATCCCGTCATCGAAGGCGCCATCGCCGCTTCATGTCAGTCCCTCGCCGGCATGGGGACCTTGCTTGAGCAGTGCGCAGACGCGCTGCGGTCCGGCCACAGCCCGGGTGACCTGCGTGGCATGAACCATGAAGACTACGAGGCCTTGTATGCGGTGGCGATGCAGCTCTACGAGGCAGGCGATCACGAGCGCGCCCTGCCCGTGAGCCTGGCCCTGGTGGCGCATGAGGCGCGCTCGGTCAAGTACAGCTACCTCGCGGGCCTGTGCCTGCAGAAGCGCCAGCGCTACCGCGAAGCGGCGGTGATGTATCTGCTGGCGCTGGGCCAGGACGCCACCCACGCGCCATCGGCCTTTCGCATGGGCGAGTGCTGCGCCGCGCTGGGCGAGACCGAAGAAGCGCAACAGGCCTACGAGCACGCCGTGGCCCTGGGGCGCGGCGACGAGCGCTACCACCATCTGCAGACCGAGGCGATGGCGCGGGTGGTGCGTCTGAGTTAG
PROTEIN sequence
Length: 175
MIDSLPVHPDPVIEGAIAASCQSLAGMGTLLEQCADALRSGHSPGDLRGMNHEDYEALYAVAMQLYEAGDHERALPVSLALVAHEARSVKYSYLAGLCLQKRQRYREAAVMYLLALGQDATHAPSAFRMGECCAALGETEEAQQAYEHAVALGRGDERYHHLQTEAMARVVRLS*