ggKbase home page

scnpilot_p_inoc_scaffold_1780_curated

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1780_curated_1
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1051
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI0002FEBDE2
potassium/proton antiporter; K11105 cell volume regulation protein A
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
scnpilot_p_inoc_scaffold_1780_curated_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1161..1820
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MN94_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK90684.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
TetR family transcriptional regulator
scnpilot_p_inoc_scaffold_1780_curated_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1879..3030
DNA (1152bp) protein (384aa)
RND family efflux transporter MFP subunit n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MN93_9BURK
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:EIK90683.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
RND family efflux transporter MFP subunit
scnpilot_p_inoc_scaffold_1780_curated_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3052..6228
DNA (3177bp) protein (1059aa)
Acriflavin resistance protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MN92_9BURK
Acriflavin resistance protein {ECO:0000313|EMBL:EIK90682.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
scnpilot_p_inoc_scaffold_1780_curated_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6278..6967
DNA (690bp) protein (230aa)
Protein-L-isoaspartate(D-aspartate) O-methyltransferase {ECO:0000313|EMBL:EIK90681.1}; EC=2.1.1.- {ECO:0000313|EMBL:EIK90681.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Protein L-isoaspartyl methyltransferase; K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
Protein-L-isoaspartate(D-aspartate) O-methyltransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MN91_9BURK
scnpilot_p_inoc_scaffold_1780_curated_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6982..7329
DNA (348bp) protein (116aa)
Rhodanese-like protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MN90_9BURK
Rhodanese-like protein {ECO:0000313|EMBL:EIK90680.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
rhodanese-like protein
scnpilot_p_inoc_scaffold_1780_curated_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7459..8790
DNA (1332bp) protein (444aa)
Type I secretion outer membrane protein TolC n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MN89_9BURK
Type I secretion outer membrane protein TolC {ECO:0000313|EMBL:EIK90679.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Type I secretion outer membrane protein TolC; K12340 outer membrane channel protein
scnpilot_p_inoc_scaffold_1780_curated_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8913..9653
DNA (741bp) protein (247aa)
Glycosyltransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MN88_9BURK
Glycosyltransferase {ECO:0000313|EMBL:EIK90678.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
glycosyltransferase
scnpilot_p_inoc_scaffold_1780_curated_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9629..11662
DNA (2034bp) protein (678aa)
3-deoxy-D-manno-octulosonic-acid transferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MN87_9BURK
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:EIK90677.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
3-deoxy-D-manno-octulosonic-acid transferase
scnpilot_p_inoc_scaffold_1780_curated_10
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11659..12906
DNA (1248bp) protein (416aa)
O-antigen polymerase n=1 Tax=uncultured bacterium RepID=K2EJH8_9BACT
O-antigen polymerase
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
scnpilot_p_inoc_scaffold_1780_curated_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12903..13982
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MN85_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK90675.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1780_curated_12
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14005..14943
DNA (939bp) protein (313aa)
N-acetylglucosaminyltransferase, putative (Modular protein) n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ASY9_AZOBR
N-acetylglucosaminyltransferase, putative (modular protein)
N-acetylglucosaminyltransferase, putative (Modular protein) {ECO:0000313|EMBL:CCD00550.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
scnpilot_p_inoc_scaffold_1780_curated_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14960..15817)
DNA (858bp) protein (286aa)
Glycosyl transferase family 2 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MN83_9BURK
Glycosyl transferase family 2 {ECO:0000313|EMBL:EIK90673.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
glycosyl transferase family protein
scnpilot_p_inoc_scaffold_1780_curated_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15920..17302)
DNA (1383bp) protein (461aa)
Phosphomannomutase/phosphoglucomutase {ECO:0000313|EMBL:EIK90672.1}; EC=5.4.2.8 {ECO:0000313|EMBL:EIK90672.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
phosphomannomutase (EC:5.4.2.8); K01840 phosphomannomutase [EC:5.4.2.8]
Phosphomannomutase/phosphoglucomutase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MN82_9BURK
scnpilot_p_inoc_scaffold_1780_curated_15
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17417..18949
DNA (1533bp) protein (511aa)
AraC family transcriptional regulator {ECO:0000313|EMBL:EIK90671.1}; EC=2.1.1.- {ECO:0000313|EMBL:EIK90671.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
AraC family transcriptional regulator; K13529 AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
AraC family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MN81_9BURK
scnpilot_p_inoc_scaffold_1780_curated_16
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18946..19482
DNA (537bp) protein (179aa)
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000313|EMBL:EIK90670.1}; EC=2.1.1.- {ECO:0000313|EMBL:EIK90670.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
adaB; O6-methylguanine-DNA methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MN80_9BURK
scnpilot_p_inoc_scaffold_1780_curated_17
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19479..20393
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MN79_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK90669.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1780_curated_18
unknown

Not on your lists

comp(20412..20897)
DNA (486bp) protein (162aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1780_curated_19
unknown

Not on your lists

comp(20922..21371)
DNA (450bp) protein (150aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1780_curated_20
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21418..21942)
DNA (525bp) protein (175aa)
Tetratricopeptide TPR_3 repeat-containing protein (Fragment) n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F972_9RHIZ
Tetratricopeptide TPR_3 repeat-containing protein {ECO:0000313|EMBL:EHS50652.1}; Flags: Fragment;; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
scnpilot_p_inoc_scaffold_1780_curated_21
unknown

Not on your lists

comp(21939..22370)
DNA (432bp) protein (144aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1780_curated_22
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22582..24288)
DNA (1707bp) protein (569aa)
Cyanophycin synthetase {ECO:0000313|EMBL:EIK90667.1}; EC=6.3.2.17 {ECO:0000313|EMBL:EIK90667.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
cyanophycin synthetase; K03802 cyanophycin synthetase [EC:6.-.-.-]
Cyanophycin synthetase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MN77_9BURK
Displaying 22 items

View Taxonomy