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scnpilot_p_inoc_scaffold_1782_curated_12

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 16191..16688

Top 3 Functional Annotations

Value Algorithm Source
LysR type regulator of tsaMBCD n=1 Tax=Comamonas testosteroni RepID=P94678_COMTE similarity UNIREF
DB: UNIREF100
  • Identity: 66.3
  • Coverage: 166.0
  • Bit_score: 226
  • Evalue 1.80e-56
HTH-type transcriptional regulator TsaR; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.3
  • Coverage: 166.0
  • Bit_score: 226
  • Evalue 2.50e-56
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 41.6
  • Coverage: 166.0
  • Bit_score: 133
  • Evalue 6.50e-29

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Taxonomy

Comamonas testosteroni → Comamonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 498
ATGAAACTGCAGACCCTGCAAGCGCTGATCGGCATCGAGGAGCTGGGCAGCATCCGCGCCGCCGCCACGCGCATGCACATGTCGCAGCCCGCGCTCACGGCGGCGATCCAGCAGCTCGAGGCGGAACTGCAGGCGCCCTTGCTGGCGCGCAGCAAGCAGGGGGTGAGCTTCACGCGCTTCGGCCAGGCCTTCATGCGGCACGCGCACCTGATCGTGTCGGAGAGCCAGCACGCGCAGGAGGAGATCGCGCAGATGCGCGGCCTGTGGGAGGGGCAGGTGCGCTTCTCCACCTCGCCGGCGATCGCGCTGGCGGTGCTGCCCCAGGCCCTGACCAGCTTCTCGGCCAAGTACCCCGGCGTGGTGCTGTCGGTGCGCGACGGCCTGTACCCCGGCGTCACGCCCGCGCTGCGCGAGGGCACGCTGGACTTCGCGATCACGCCCGCGCATCGGCAGGAGGTGCAGAGCGACATCGTGGCCGAGCCGCTCTACCAGAGCGAC
PROTEIN sequence
Length: 166
MKLQTLQALIGIEELGSIRAAATRMHMSQPALTAAIQQLEAELQAPLLARSKQGVSFTRFGQAFMRHAHLIVSESQHAQEEIAQMRGLWEGQVRFSTSPAIALAVLPQALTSFSAKYPGVVLSVRDGLYPGVTPALREGTLDFAITPAHRQEVQSDIVAEPLYQSD