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scnpilot_p_inoc_scaffold_2507_curated_4

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 2897..4795

Top 3 Functional Annotations

Value Algorithm Source
Lipid A export ATP-binding/permease protein MsbA {ECO:0000256|HAMAP-Rule:MF_01703}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01703};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.5
  • Coverage: 640.0
  • Bit_score: 1104
  • Evalue 0.0
lipid a ABC exporter, fused ATPase and inner membrane subunits msba; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] similarity KEGG
DB: KEGG
  • Identity: 65.4
  • Coverage: 601.0
  • Bit_score: 737
  • Evalue 2.90e-210
Lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTE1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 640.0
  • Bit_score: 1104
  • Evalue 0.0

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1899
GTGTGCCCTCGCGGCCTGCTGGACCGCGATCGCGCCCATTGGTTCCCCTCCATCCGCCCCGATTTGAACCCCTCCGACCCGTCCGCCGCCCTCCCCTCCGGCCCGCTGCGCCAGCGGCTGCTGCGCGTCTGGCCCTACTTCCGGGACGCGAAGACCGGCATCTTCTTCGCCGCGCTGGCCACCGTGATCGGGGCGCTGACCGAGCCCCTGATCCCCGCCCTGCTCAAGACCCTGCTCGACGAGGGCTTCAACGATGGCCGCATTCCGCTGTGGATGGTGCCGCTGGCCTTCATGGGCCTGTTCGGCGTGCGCGGCATCGCCTCCTTCGTGGCGCAGTACGCCCTGTCGTACACGGCCAACGTGGGCATGCTCAACCTGCGCCGCGCCATGTTCGCCAAGCTCAACGCGGCCCAGCTGGCGCTGTTCTCGCGCCAGAGTGCGAGCAAGCTGTCCAACACCCTGGTCTATGAGGTGCAGACCGGCTCGCAGATGCTGGTGTCGTCCCTGCTCACCCTCACCCGCGACAGCCTCACGCTGGTGGCGCTGATGGGCTACCTGCTCTACCTGAACTGGAAGCTCACGCTGATCGTGATCGCGGTGTTCCCGGGCCTGGCCTGGATCATGCGAGTGCTCTCCAAGCGCCTGTACCGCCTCACGCGCGCCAGCCAGCAGGCCACCGACGAGCTGGCCTACGTGGTGGAGGAAAACGCCCTGGCCCACCGCGTGGTGCGCCTGCACGGCGCGCAGCGCCGCCAGGCCGAGCGCTTCGACCAGCTGAGCGTGGCGCTGCGCCGCCTGGCGCTCAAGAGCACCATCGCCATGGCCGCCATGACGCCCTTCACCCAGCTGCTGGCCTCGGCCGCGCTGTCGGCGGTGATCGCGGTGGCGCTGTGGCAGAGCAGCACCACGGGCGTCACGGTGGGCAACTTCGTGGCCTTCGTCACCGCCATGCTGATGCTGATCGCCCCGATCCGGCACCTGGCCGAGATCGCCTCGCCCATCACGCGCGGCCTGGCGGCGCTGGAGCGCGGCATCGAGCTCATCGAGCAGACGCCCGAACAGACCGGCGGCACGCACGTGGCCGAACGCGTGCAAGGCGCCATCGCGCTGCGCGGCGTGTGGGTGCGCTACCCGCCCAAGGCCGACGGCGCCGACGCGGCCGAGGCCGGCCTGGCGCTGCGCGGCATCGAACTGGACATCCGCCCCGGCGAAGTGGTGGCCTTCGTCGGCCCCTCGGGCTCGGGCAAGACCACGCTCATCAACCTGCTGCCGCGCTTCGTGGAGGTCGAGCGCGGGGTGGTCACGCTGGACGGCGTGCCCCTGCCCGACTGGGACCTGGCCAGCCTGCGCCGCCAGTTCGCGCTGGTGAGTCAGGACGTGGTAATGCTCAACGACAGCCTGGCCGCCAACGTGGCCCTGGGCGCGGTCGACGGCGAACTCGACGAAGCCCGCGTGCACGCCGCCCTGCTCTCGGCCAACCTGGGCGAGCTGCTGGAGCGCCTGCCGCAGGGCATGCACACCAACGTGGGCCACAACGCCACCGAGCTCTCGGGCGGCCAGCGCCAGCGCCTGGCCATCGCGCGCGCCATCTACAAGGACTCGCCGGTGCTGATCCTGGACGAGGCGACGTCGGCGCTGGACAACGAGTCCGAGCGCCTGGTGCAGGACGCGCTGTCGCGCCTGATGAAAGGCCGCACCACCCTGGTCATCGCGCACCGGCTGTCCACCATCGAGCACGCGGACCGCGTGATCGTGCTGGCCGAGGGCCGCATCGTGGAACAGGGGCGGCACGCCGATCTGCTGGCGGCCGACGGCGTGTACGCGCGGCTGCACGCGCAAGGACTGGGCACGGCGGGCGCGGACGCCCCGGCCAGCCCACCCCAGGTCACCCCGGATTGA
PROTEIN sequence
Length: 633
VCPRGLLDRDRAHWFPSIRPDLNPSDPSAALPSGPLRQRLLRVWPYFRDAKTGIFFAALATVIGALTEPLIPALLKTLLDEGFNDGRIPLWMVPLAFMGLFGVRGIASFVAQYALSYTANVGMLNLRRAMFAKLNAAQLALFSRQSASKLSNTLVYEVQTGSQMLVSSLLTLTRDSLTLVALMGYLLYLNWKLTLIVIAVFPGLAWIMRVLSKRLYRLTRASQQATDELAYVVEENALAHRVVRLHGAQRRQAERFDQLSVALRRLALKSTIAMAAMTPFTQLLASAALSAVIAVALWQSSTTGVTVGNFVAFVTAMLMLIAPIRHLAEIASPITRGLAALERGIELIEQTPEQTGGTHVAERVQGAIALRGVWVRYPPKADGADAAEAGLALRGIELDIRPGEVVAFVGPSGSGKTTLINLLPRFVEVERGVVTLDGVPLPDWDLASLRRQFALVSQDVVMLNDSLAANVALGAVDGELDEARVHAALLSANLGELLERLPQGMHTNVGHNATELSGGQRQRLAIARAIYKDSPVLILDEATSALDNESERLVQDALSRLMKGRTTLVIAHRLSTIEHADRVIVLAEGRIVEQGRHADLLAADGVYARLHAQGLGTAGADAPASPPQVTPD*