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scnpilot_p_inoc_scaffold_2507_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2507_curated_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(65..841)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTE4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK92484.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2507_curated_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(850..1410)
DNA (561bp) protein (187aa)
OmpA/MotB n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTE3_9BURK
OmpA/MotB {ECO:0000313|EMBL:EIK92483.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
pal; peptidoglycan-associated lipoprotein; K03640 peptidoglycan-associated lipoprotein
scnpilot_p_inoc_scaffold_2507_curated_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1476..2762)
DNA (1287bp) protein (429aa)
Protein TolB n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTE2_9BURK
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
tolB; translocation protein TolB; K03641 TolB protein
scnpilot_p_inoc_scaffold_2507_curated_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2897..4795
DNA (1899bp) protein (633aa)
Lipid A export ATP-binding/permease protein MsbA {ECO:0000256|HAMAP-Rule:MF_01703}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01703};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
lipid a ABC exporter, fused ATPase and inner membrane subunits msba; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-]
Lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTE1_9BURK
scnpilot_p_inoc_scaffold_2507_curated_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4858..5385
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTE0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK92480.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2507_curated_6
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5420..6907)
DNA (1488bp) protein (496aa)
GntR family transcriptional regulator with aminotransferase domain n=1 Tax=Pseudomonas stutzeri DSM 10701 RepID=I7AAU5_PSEST
GntR family transcriptional regulator {ECO:0000313|EMBL:AKC78190.1}; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris.;"
GntR family transcriptional regulator
scnpilot_p_inoc_scaffold_2507_curated_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6973..8208
DNA (1236bp) protein (412aa)
Benzoate transporter n=2 Tax=Delftia acidovorans RepID=A9C2J3_DELAS
benzoate transporter; K05782 benzoate membrane transport protein
Benzoate membrane transporter {ECO:0000313|EMBL:EPD39417.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
scnpilot_p_inoc_scaffold_2507_curated_8
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8208..9008
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GA78_ALIDK
hypothetical protein; K06997
Uncharacterized protein {ECO:0000313|EMBL:AEB83433.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_p_inoc_scaffold_2507_curated_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9013..10569)
DNA (1557bp) protein (519aa)
ribonuclease G (EC:3.1.4.-); K08301 ribonuclease G [EC:3.1.26.-]
Ribonuclease G n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTD9_9BURK
Ribonuclease G {ECO:0000313|EMBL:EIK92479.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_2507_curated_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10583..11278)
DNA (696bp) protein (232aa)
Maf-like protein Q5W_0610 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTD8_9BURK
Maf-like protein Q5W_0610 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
septum formation protein Maf; K06287 septum formation protein
scnpilot_p_inoc_scaffold_2507_curated_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11275..11742)
DNA (468bp) protein (156aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophag
rRNA large subunit methyltransferase; K00783 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTD7_9BURK
scnpilot_p_inoc_scaffold_2507_curated_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11739..12401)
DNA (663bp) protein (221aa)
Ribosomal silencing factor RsfS n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTD6_9BURK
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
iojap family protein; K09710 ribosome-associated protein
Displaying 12 items

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