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scnpilot_p_inoc_scaffold_1040_curated_32

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(27703..28443)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MH16_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 68.9
  • Coverage: 251.0
  • Bit_score: 324
  • Evalue 1.20e-85
TetR family transcriptional regulator {ECO:0000313|EMBL:EIK88506.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.9
  • Coverage: 251.0
  • Bit_score: 324
  • Evalue 1.70e-85
TetR family transcriptional regulator; K03577 TetR/AcrR family transcriptional regulator, acrAB operon repressor similarity KEGG
DB: KEGG
  • Identity: 61.4
  • Coverage: 210.0
  • Bit_score: 244
  • Evalue 3.00e-62

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 741
ATGGCCCGCCGCACCAAAGCTGAAGCACAGGAAACACGCAACCGGCTGCTCGACGCCGCCGAGCGCCTGTTCCAGGCCAAGGGCGTGTCGGGCACCACGCTGAACGACATCGCCACCGCCGCGGGCGCCACGCGCGGCGCGGTCTACCACCACTTCAAGGACAAGGCGGACCTGTTCAACGCCATGATGGAGCGCGTGACCCTGCCGCTGGAGACCTCACTCGCCGAGGCGGGCCGCGCGGCCGCCGCCGAGGACGATCCCCTGCGCTCCCTGCGCGACACCATGGGCAGCGCCTTGCGCCAGACGGCGCGCGATGAGCGCACGCGGCGCGTGTTCGAGGTGGCCACGCACAAGGTGGAATACACCGACGAGATGCAGGCCGTGCGCGATCGCCACCTGCGGGTGCGCAACGAGTGCATGGCCGTGACCCGAGACACCCTTCAGCTGGCCGCGCAACGCCAGGGCCTGAGCCTGCCCATTCCCCTGTCGGCGGCGGCGCTGGGCCTGCACGTGATGATCGATGGCCTGATCCAGAACTGGCTGCTCGACCCCAAGGCCTTCGACCTGGTCGCGCGCGGACGCCAGACCATGGACATCTACCTCACCGGCCTGGGCTTTCGGGAGCCGGCGGCCGACCGCCGTCAAGGCCGCGAACGCTCCGGCGGCGCGACCGCCGGCCGCAAGCGCCAGGCCATGGGCGAGGCCATGCCCACCACGCCCCCCACGGCCCAGAACACATAG
PROTEIN sequence
Length: 247
MARRTKAEAQETRNRLLDAAERLFQAKGVSGTTLNDIATAAGATRGAVYHHFKDKADLFNAMMERVTLPLETSLAEAGRAAAAEDDPLRSLRDTMGSALRQTARDERTRRVFEVATHKVEYTDEMQAVRDRHLRVRNECMAVTRDTLQLAAQRQGLSLPIPLSAAALGLHVMIDGLIQNWLLDPKAFDLVARGRQTMDIYLTGLGFREPAADRRQGRERSGGATAGRKRQAMGEAMPTTPPTAQNT*