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scnpilot_p_inoc_scaffold_1040_curated_33

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 28555..29721

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MH17_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 390.0
  • Bit_score: 705
  • Evalue 3.10e-200
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EIK88507.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 390.0
  • Bit_score: 705
  • Evalue 4.40e-200
secretion protein HlyD; K03585 membrane fusion protein similarity KEGG
DB: KEGG
  • Identity: 72.8
  • Coverage: 378.0
  • Bit_score: 522
  • Evalue 1.20e-145

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1167
ATGCCCAGTTCCTTCCCGCTGCCGCGCTCCCGCGCGGCCAAAACCCTTGTTGCCATCGCCCTGGCCGCCCTGGTGGTCGCCTGCGGCAAGCAGGGCGCCCCGGCCCAGGCCGGCGGCGGCGCGCCGCCTCCACCCGAGGTGGGCGTGATCACCGTGGCTCTGGGCGATGTGGGCCTGGTCAACGAACTGCCGGGTCGCCTGGAGGCCTCGCGCGTCTCCGAGGTGCGGGCGCGCGCCGCCGGCATCCTCCAGCAGCGCCTGTTCCGCGAGGGCAGCGAGGTCAAGGCCGGCCAGCGCCTGTTCCAGATCGATCCCGCGCCGTACCAGGCCACGCTGCAGAGCGCGCGCGCCACGCTGGCCCGCGCCGAGGCCAACCTGACCCAGGCCAAGGCCCTGGCCGAGCGCTATGCCCCGCTGGTGAAGGAAAACGCCATCAGCCAGCAGGAATACGCCAACGCCCAGGCCGCGCAGAAGCAGGCCGAGGCCGACGTGGCCGCTGGCCGCGCCGCGGTGCAGACCGCCAATATCAACCTCGGCTACGCCAACGTCACGGCGCCCATCAGCGGGCGCATCGGCCGCGCGCTGGTGACCGAGGGCGCGCTGGTGGGGCAGGGCGAGCCCACGCCGCTGGCCGTGATCCAGCAGATCAACCCCATGTACGTGAACTTCACGCAGTCGGCCTCCGAGGTCTACCGCCTGCGGCGCGCCTTGCAGAGCGGCTCGCTCAAGGGCGCGGGCGATCAGGTCGCCCGCGTGAAGATCGTGCTGGAGGACGGCTCGGTCTATGGCCGCGATGGCCGCCTGCTGTTTTCCGACCTCACCGTGGACAGCGCCACCGGCCAGGTGACGCTGCGCGCCGAGGTGCCCAACCCCGATGGCGTGCTGCTGCCCGGCCTGTATGTGCGCGTGCGCATCGAACAGGCCACGGCGGGCAATGCCCTGCTGCTGCCGCAGCAGGCCGTCACGCGCACGGCGCAGGGCGATTCGGTGATGGTGGTCGATGGCGAAGGCAAGGTCGCGCCGCGCAACATCACCGTGCGGGGCCAGCAAGAGGGTCAGTGGGTCGTGACCGAGGGCCTCAAGGCCGGTGACCAGGTCATGGTCGACGGCTTCCAGAAACTGCGTCCGGGCGGCACCGTCAAGCCCGTGCCCTGGAAGAAGCCGGGT
PROTEIN sequence
Length: 389
MPSSFPLPRSRAAKTLVAIALAALVVACGKQGAPAQAGGGAPPPPEVGVITVALGDVGLVNELPGRLEASRVSEVRARAAGILQQRLFREGSEVKAGQRLFQIDPAPYQATLQSARATLARAEANLTQAKALAERYAPLVKENAISQQEYANAQAAQKQAEADVAAGRAAVQTANINLGYANVTAPISGRIGRALVTEGALVGQGEPTPLAVIQQINPMYVNFTQSASEVYRLRRALQSGSLKGAGDQVARVKIVLEDGSVYGRDGRLLFSDLTVDSATGQVTLRAEVPNPDGVLLPGLYVRVRIEQATAGNALLLPQQAVTRTAQGDSVMVVDGEGKVAPRNITVRGQQEGQWVVTEGLKAGDQVMVDGFQKLRPGGTVKPVPWKKPG