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scnpilot_p_inoc_scaffold_4104_curated_10

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 8323..8628

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Pseudomonas sp. GM49 RepID=J2S5I5_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 58.4
  • Coverage: 101.0
  • Bit_score: 113
  • Evalue 1.80e-22
Transcriptional regulator {ECO:0000313|EMBL:EJM62051.1}; Flags: Precursor;; TaxID=1144331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM49.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.4
  • Coverage: 101.0
  • Bit_score: 113
  • Evalue 2.50e-22
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.8
  • Coverage: 102.0
  • Bit_score: 112
  • Evalue 7.30e-23

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Taxonomy

Pseudomonas sp. GM49 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 306
ATGGACTTCCGCCGCCTCGACCTGAACCTGCTGGTGGTGTTCGACGCCGTGCTCAGCGAGCGCAGCGTCACGCGCGCGGCCGAGCGGCTGGCGCTCACGCAGCCGGCGGTCAGCCACGCGCTGTCGCGCCTGCGAGCGGCCTGCGGCGATCCCATCGTGGTGCGCCAGGGACATGGCATGGTGCCCACGCCACGGGCCGTGGCCCTGCACCCGGAGGTGCGCGCCCTGCTGGCGCGCGCGCAGCGCGTGTTCTCGCTGTCCAGTGCCTTCGATCCGCGCCAGTCGCAGCGCCAGTTCCACCTCGGC
PROTEIN sequence
Length: 102
MDFRRLDLNLLVVFDAVLSERSVTRAAERLALTQPAVSHALSRLRAACGDPIVVRQGHGMVPTPRAVALHPEVRALLARAQRVFSLSSAFDPRQSQRQFHLG