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scnpilot_p_inoc_scaffold_4104_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_4104_curated_1
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..640)
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI0003778306
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABE46968.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
scnpilot_p_inoc_scaffold_4104_curated_2
R_NC10_66_22, NC10, Bacteria

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755..1306
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00036273A7
tripartite ATP-independent periplasmic transporter DctQ
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
scnpilot_p_inoc_scaffold_4104_curated_3
R_NC10_66_22, NC10, Bacteria

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1365..2654
DNA (1290bp) protein (430aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00037A7620
TRAP dicarboxylate transporter permease protein DctM subunit
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
scnpilot_p_inoc_scaffold_4104_curated_4
R_NC10_66_22, NC10, Bacteria

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2697..3701
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI0003638BCA
TRAP dicarboxylate transporter, DctP subunit
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
scnpilot_p_inoc_scaffold_4104_curated_5
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3698..4675
DNA (978bp) protein (326aa)
D-3-phosphoglycerate dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95]
D-3-phosphoglycerate dehydrogenase (Phosphoglycerate dehydrogenase)-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y0Z0_RAMTT
D-3-phosphoglycerate dehydrogenase (Phosphoglycerate dehydrogenase)-like protein {ECO:0000313|EMBL:AEG92208.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
scnpilot_p_inoc_scaffold_4104_curated_6
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4717..5364
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y0Z1_RAMTT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG92209.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
scnpilot_p_inoc_scaffold_4104_curated_7
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5384..6313
DNA (930bp) protein (310aa)
fructokinase; K00874 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI000369DC41
Fructokinase-like protein {ECO:0000313|EMBL:AEG92210.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
scnpilot_p_inoc_scaffold_4104_curated_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6314..7195)
DNA (882bp) protein (294aa)
2,3-dimethylmalate lyase (EC:4.1.3.32)
2,3-dimethylmalate lyase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VEE9_SPHWW
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
scnpilot_p_inoc_scaffold_4104_curated_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7201..8193)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WC27_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD37298.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein
scnpilot_p_inoc_scaffold_4104_curated_10
Pseudomonas sp. GM49, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8323..8628
DNA (306bp) protein (102aa)
Transcriptional regulator n=1 Tax=Pseudomonas sp. GM49 RepID=J2S5I5_9PSED
Transcriptional regulator {ECO:0000313|EMBL:EJM62051.1}; Flags: Precursor;; TaxID=1144331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM49.;"
LysR family transcriptional regulator
Displaying 10 items

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