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scnpilot_p_inoc_scaffold_1393_curated_12

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(13575..13988)

Top 3 Functional Annotations

Value Algorithm Source
Protocatechuate-alpha chain {ECO:0000313|EMBL:EIK89724.1}; EC=1.13.11.8 {ECO:0000313|EMBL:EIK89724.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 137.0
  • Bit_score: 248
  • Evalue 4.00e-63
Protocatechuate-alpha chain n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKI4_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 84.7
  • Coverage: 137.0
  • Bit_score: 248
  • Evalue 2.80e-63
ligA; protocatechuate 4,5-dioxygenase, subunit alpha similarity KEGG
DB: KEGG
  • Identity: 69.5
  • Coverage: 128.0
  • Bit_score: 185
  • Evalue 1.20e-44

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 414
ATGACCCCCGCCACGCGCGACTACCACGACATCCCCGGCACCTACGTGTTCGACGGCGCCCACCAGCGCAAGGGCTACTGGCTCAATATGTTCTGCAAGTCGCTAGACGTGGCGGCCCACCGCGACCAGTTCCGCGCCAACCCCAACGACTACCTGGCGCGCTTTCCCCTGAGCGACGCCCAGCGCGAGGCCGTGCTGATGCGCGACTGGCTGGGCCTGCTGCGCCTGGGCGGCAACATCTACTACACCTTCAAGCTCGCCATCTTCGACGGCCTGAGCATGCAGCACGTGGGCGCCGCCATGTCGGGCACCGGCATGACGGTGGACGACTTCCGCCGCATGATGGTCTCGGGCGGCCGCCCGGCCAAAGGCATGCGCAGCCTGCGCCAGAACGCGGAGGTGGGCCATGGCTGA
PROTEIN sequence
Length: 138
MTPATRDYHDIPGTYVFDGAHQRKGYWLNMFCKSLDVAAHRDQFRANPNDYLARFPLSDAQREAVLMRDWLGLLRLGGNIYYTFKLAIFDGLSMQHVGAAMSGTGMTVDDFRRMMVSGGRPAKGMRSLRQNAEVGHG*