ggKbase home page

scnpilot_p_inoc_scaffold_1393_curated_19

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 20579..21469

Top 3 Functional Annotations

Value Algorithm Source
Type III effector Hrp-dependent outers n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IMG4_METNO similarity UNIREF
DB: UNIREF100
  • Identity: 68.0
  • Coverage: 297.0
  • Bit_score: 398
  • Evalue 6.20e-108
Type III effector {ECO:0000313|EMBL:KFG68898.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.0
  • Coverage: 297.0
  • Bit_score: 413
  • Evalue 3.40e-112
type III effector Hrp-dependent protein similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 297.0
  • Bit_score: 398
  • Evalue 2.00e-108

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microvirga aerilata → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 891
GTGAGCGACGCCCGTGCGCTCCCCCCGGGGCCGCTGATCGCCTTCTATGGCGACGACTTCACGGGCTCGTCGGCGGCCATGGAGGTGCTGGCCTTCGCCGGGCTCGAGACCATCCTGTTCCTCGCGCCGCCCACGCAGGAACGCCTGGCCCGTTTCGCGCACTACCGCGCCATCGGCGTCGCGGGCGTGGCGCGCTCGCGACCGCCCGAGTGGATGGACGAGCACCTGCCCCCCGTCTTCGAGCAACTCGCCGGCATCGGCGCGCCCGTCGTCCACTACAAGGTGTGTTCGACCTTCGACTCGGCGCCCCACATCGGCAACATCGGCCGCGCGGCCGAGATCGCCCGGCGGCGCTTCCCGGGGTGGATCCCGCTCGTGGTGTCGGACCCCGGCATGGGCCGCTTCCAGGCCTTCGGCAACCTGTTTGCGCACGCCAACGGCGTGGGCTACCGGCTCGACCGCCACCCCACCATGGCGGCCCACCCCACCACGCCCATGCACGAGGCCGACCTGGGCCGCCACCTGGCCGCGCAGACCGATCTGCGCGTGGGCCTGGTGGATTTCGCCAGCATGAAGCGCGGCCGGGCCGATGCACTGTTGGCGCAGGAGATCGAACGCGGCGCGGCCATCGTCTCGGTGGACGTGCTGGACCCCGAAACCCTGCGCGAGGCCGGCCGCCTGATCTGGGAACGGGGCGCGGCGCAGCAGTTCGTGCTGGGCTCGCAAGGCGTCGAGCAGGCGCTGGTGGCGCACTGGCGCGCGGCCGGGCTGATGCCGCTCACCTCGGCCAGCGTCGGCTGCGCCCGCGTGGAGCGCCTCGCGGCCGTGTCGGGTTCGGTGTCGCCGATCACGGCGGCGCAGATCGAGCACGCCTGCGCGCGGGGCTTCGAG
PROTEIN sequence
Length: 297
VSDARALPPGPLIAFYGDDFTGSSAAMEVLAFAGLETILFLAPPTQERLARFAHYRAIGVAGVARSRPPEWMDEHLPPVFEQLAGIGAPVVHYKVCSTFDSAPHIGNIGRAAEIARRRFPGWIPLVVSDPGMGRFQAFGNLFAHANGVGYRLDRHPTMAAHPTTPMHEADLGRHLAAQTDLRVGLVDFASMKRGRADALLAQEIERGAAIVSVDVLDPETLREAGRLIWERGAAQQFVLGSQGVEQALVAHWRAAGLMPLTSASVGCARVERLAAVSGSVSPITAAQIEHACARGFE