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scnpilot_p_inoc_scaffold_1398_curated_16

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 12801..13625

Top 3 Functional Annotations

Value Algorithm Source
IclR helix-turn-helix protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPU0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 272.0
  • Bit_score: 465
  • Evalue 3.80e-128
IclR helix-turn-helix protein {ECO:0000313|EMBL:EIK91230.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 272.0
  • Bit_score: 465
  • Evalue 5.40e-128
kipR; IclR family regulatory protein similarity KEGG
DB: KEGG
  • Identity: 47.4
  • Coverage: 274.0
  • Bit_score: 220
  • Evalue 6.70e-55

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 825
ATGCCCGCAGTCGCCGAATCCGACCACGACACCGCCAGCCCGCAGGCCTCGCTCACGCAAAGCCTGGACCGGGCCATTGGCCTGCTGGAAGAGGTGGTGAACCACGCCGCGTCCGGCGCCGCGCTGGGCGCGCTGGCCGAACGGGCGCGCCTGTCCAAGCCCACGGCGCACCGCCTGCTCAACGGCCTGCGCAAGCTGGGCCTGGTGGACTACGACGAGAAGACGCGCCTGTTCTTCCCCGGCCTCAAGCTCTACCGCATGGGCCTGGCCTCGGCCGCGCGCTTCGACCTGGTGCAGTTGGCCCAGCCCGGCATGGCCCTGCTGGCCGAGGAGACCGGCGACACGGTCTACCTCTCGCTGCGCGCCGGCGACAGCGCGCTGTGCGTGGCGCGCCAGACCGGCTCCTTCCCGATTCGCACGCTCACGCTGGAGGTGGGCGACTACCGCCCGCTGGGCCTGGGCGCCGGCAGCCTGGCCTTGCTGGCCGCGCTGCCCGACGCCGAGGTCGAGCAGGTGATCGCGCGCAACCGCGAGAAGCTCGCGCCGCACGCCAACTTCGACCCGGTCAACCTGCGCGCCATGGTGCGCCAGACGCGCGAGCAGGGCCACTCGCTCAACGACGGCAAGATGCTGCCCGAGATGGCCGCCATCGGCGTCACCGTGCGCGACGTGGCGGGCCGTCCGGCGGCGGCGCTGTCCATCGCCACCATCACCAGCCGCATGCGGCCCGAGCGGCGCGCCTCCGTCGTGGCGCTGCTGATGCGCGAGGCGCGCGCGCTCGAGCAGGCCCTGGGCGTGGCGCCCGCCCCGGAGGCGCCCCGATGA
PROTEIN sequence
Length: 275
MPAVAESDHDTASPQASLTQSLDRAIGLLEEVVNHAASGAALGALAERARLSKPTAHRLLNGLRKLGLVDYDEKTRLFFPGLKLYRMGLASAARFDLVQLAQPGMALLAEETGDTVYLSLRAGDSALCVARQTGSFPIRTLTLEVGDYRPLGLGAGSLALLAALPDAEVEQVIARNREKLAPHANFDPVNLRAMVRQTREQGHSLNDGKMLPEMAAIGVTVRDVAGRPAAALSIATITSRMRPERRASVVALLMREARALEQALGVAPAPEAPR*