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scnpilot_p_inoc_scaffold_1398_curated

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1398_curated_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..880
DNA (879bp) protein (293aa)
alcohol dehydrogenase; K13953 alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
Alcohol dehydrogenase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPV3_9BURK
Alcohol dehydrogenase {ECO:0000313|EMBL:EIK91243.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_1398_curated_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

997..1428
DNA (432bp) protein (144aa)
Heat shock protein Hsp20 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPV2_9BURK
Heat shock protein Hsp20 {ECO:0000313|EMBL:EIK91242.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
heat shock protein Hsp20
scnpilot_p_inoc_scaffold_1398_curated_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1425..2927
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPV1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91241.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein; K07028
scnpilot_p_inoc_scaffold_1398_curated_4
unknown

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3012..3365
DNA (354bp) protein (118aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1398_curated_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3759..4769
DNA (1011bp) protein (337aa)
Pyruvate dehydrogenase (Lipoamide) {ECO:0000313|EMBL:EIK91240.1}; EC=1.2.4.1 {ECO:0000313|EMBL:EIK91240.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
pyruvate dehydrogenase (lipoamide) (EC:1.2.4.1); K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
Pyruvate dehydrogenase (Lipoamide) n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPV0_9BURK
scnpilot_p_inoc_scaffold_1398_curated_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4792..5850
DNA (1059bp) protein (353aa)
transketolase; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
Transketolase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPU9_9BURK
Transketolase {ECO:0000313|EMBL:EIK91239.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_1398_curated_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5847..6116
DNA (270bp) protein (90aa)
Biotin/lipoyl attachment n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPU8_9BURK
Biotin/lipoyl attachment {ECO:0000313|EMBL:EIK91238.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
biotin/lipoyl attachment
scnpilot_p_inoc_scaffold_1398_curated_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6126..6815
DNA (690bp) protein (230aa)
biotin/lipoate A/B protein ligase; K03800 lipoate-protein ligase A [EC:2.7.7.63]
Biotin lipoate a b protein ligase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPU7_9BURK
Biotin lipoate a b protein ligase {ECO:0000313|EMBL:EIK91237.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_1398_curated_9
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6812..7465
DNA (654bp) protein (218aa)
Transport-associated n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12E91_POLSJ
transport protein
Transport-associated {ECO:0000313|EMBL:ABE43151.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
scnpilot_p_inoc_scaffold_1398_curated_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7528..8001
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPU5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91235.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1398_curated_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8029..8496)
DNA (468bp) protein (156aa)
XRE family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPU4_9BURK
XRE family transcriptional regulator {ECO:0000313|EMBL:EIK91234.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
XRE family transcriptional regulator
scnpilot_p_inoc_scaffold_1398_curated_12
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8588..9142)
DNA (555bp) protein (185aa)
deaminase n=1 Tax=Methyloversatilis universalis RepID=UPI00035E249A
Deaminase {ECO:0000313|EMBL:EYC50523.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara R.;"
bifunctional deaminase-reductase domain protein
scnpilot_p_inoc_scaffold_1398_curated_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9197..10045)
DNA (849bp) protein (283aa)
Putative beta subuniT of citra lyase protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPU3_9BURK
Putative beta subuniT of citra lyase protein {ECO:0000313|EMBL:EIK91233.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
msi; putative SIMILAR TO BETA SUBuniT OF CITRATE LYASE protein
scnpilot_p_inoc_scaffold_1398_curated_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10042..11277)
DNA (1236bp) protein (412aa)
III protein, CoA-transferase family n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPU2_9BURK
III protein, CoA-transferase family {ECO:0000313|EMBL:EIK91232.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1398_curated_15
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11270..12649)
DNA (1380bp) protein (460aa)
Putative Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPU1_9BURK
Putative Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) {ECO:0000313|EMBL:EIK91231.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
putative Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A)
scnpilot_p_inoc_scaffold_1398_curated_16
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12801..13625
DNA (825bp) protein (275aa)
IclR helix-turn-helix protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPU0_9BURK
IclR helix-turn-helix protein {ECO:0000313|EMBL:EIK91230.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
kipR; IclR family regulatory protein
scnpilot_p_inoc_scaffold_1398_curated_17
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13687..14379
DNA (693bp) protein (231aa)
Aldolase citrate lyase family protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPT9_9BURK
Aldolase citrate lyase family protein {ECO:0000313|EMBL:EIK91229.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase
scnpilot_p_inoc_scaffold_1398_curated_18
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14410..15234
DNA (825bp) protein (275aa)
L-fuculose-phosphate aldolase (fucA) (EC:4.1.2.17)
Class II Aldolase and Adducin domain protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPT8_9BURK
Class II Aldolase and Adducin domain protein {ECO:0000313|EMBL:EIK91228.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_1398_curated_19
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15301..16380
DNA (1080bp) protein (360aa)
Extracellular solute-binding protein, family protein 7 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPT7_9BURK
Extracellular solute-binding protein, family protein 7 {ECO:0000313|EMBL:EIK91227.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
dctP7; TRAP dicarboxylate transporter periplasmic binding protein DctP7
scnpilot_p_inoc_scaffold_1398_curated_20
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16439..16981
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPT6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91226.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1398_curated_21
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16978..18270
DNA (1293bp) protein (431aa)
TrapT family protein, dctM subunit, C4-dicarboxylate transport n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPT5_9BURK
TrapT family protein, dctM subunit, C4-dicarboxylate transport {ECO:0000313|EMBL:EIK91225.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
TRAP dicarboxylate transporter-DctM subunit
scnpilot_p_inoc_scaffold_1398_curated_22
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18270..19670
DNA (1401bp) protein (467aa)
amidase; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Amidase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPT4_9BURK
Amidase {ECO:0000313|EMBL:EIK91224.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_1398_curated_23
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19719..21428
DNA (1710bp) protein (570aa)
Thiamine pyrophosphate enzyme, central domain protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MPT3_9BURK
Thiamine pyrophosphate enzyme, central domain protein {ECO:0000313|EMBL:EIK91223.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
ilvB; putative acetolactate synthase large subunit
Displaying 23 items

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