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scnpilot_p_inoc_scaffold_2479_curated_5

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(2365..3018)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y0B5_LEPCP similarity UNIREF
DB: UNIREF100
  • Identity: 77.3
  • Coverage: 211.0
  • Bit_score: 312
  • Evalue 3.30e-82
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 77.3
  • Coverage: 211.0
  • Bit_score: 312
  • Evalue 1.00e-82
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ACB36594.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.3
  • Coverage: 211.0
  • Bit_score: 312
  • Evalue 4.60e-82

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Taxonomy

Leptothrix cholodnii → Leptothrix → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGAACCTGCCACGCAAGGAAGCCTCGCTGGGGGCGAGCCATTCGCCCCTGACCACGCTGGTGGTCGAGGCCCTGCGCGAACGCATCATGGGTGGCGCCATCTCGCCGGGCGAGCGCCTGGTGGAGAGCCGCCTGTCCGACGAACTCGGCGTCTCGCGCATGCCCGTGCGCGAGGCCCTGCGCCAGCTGGCCGCCGAAGGCCTGGTCACCATCGAGCCGCGCCGCGGCGCCTCGGTCACCGCCTTCTCGCCCGAGCAGGTGCGCGAACTGGTCGAGGTGCGCGCCACGCTCGAAGGCCTCAACGCCAAGCTCGCCGCGCAGCGCCACGACGAGAAGCAGATCGCCGCGATGGAAAGCATCCTGGCCGAGGGCACGCGCATGGCCACCAGCGACGACCAGGCCGCGCTGCTGGAGATGAACCAGCGCTTCCACGACGCCTTGGGCAGCATCGCCGCCAATTCGGTGCTGCAGGAGCTGATGCGCTCGCTGCGCGACCGCACCGCGCTGATCTTCGCCCCGCTCAACCGCACGCGCGGCCAACAGAACTGGGACGAGCACGCCGCGATCCTGCGCGCGGTGATCAAGGGCGACGCGGAACTCGCCTCGCTGCTCGCCATGCGCCACGTGTACAACGCGGCGCAGATGGAACCCTGA
PROTEIN sequence
Length: 218
MNLPRKEASLGASHSPLTTLVVEALRERIMGGAISPGERLVESRLSDELGVSRMPVREALRQLAAEGLVTIEPRRGASVTAFSPEQVRELVEVRATLEGLNAKLAAQRHDEKQIAAMESILAEGTRMATSDDQAALLEMNQRFHDALGSIAANSVLQELMRSLRDRTALIFAPLNRTRGQQNWDEHAAILRAVIKGDAELASLLAMRHVYNAAQMEP*