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scnpilot_p_inoc_scaffold_2479_curated_6

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(3211..4242)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane protein (Porin) n=1 Tax=Polaromonas sp. CF318 RepID=J3CT27_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 44.4
  • Coverage: 369.0
  • Bit_score: 302
  • Evalue 5.40e-79
Outer membrane protein (Porin) {ECO:0000313|EMBL:EJL77944.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.4
  • Coverage: 369.0
  • Bit_score: 302
  • Evalue 7.50e-79
porin similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 360.0
  • Bit_score: 297
  • Evalue 4.20e-78

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Taxonomy

Polaromonas sp. CF318 → Polaromonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1032
ATGAAAAAAAGCATCCTGCTGATCTCCGCCACGCTGGCCACCGGCGCGGCCATGGCGCAATCCAGCGTCACCCTGTACGGCCTGGCCGACATGTACCTGTCGAGCCAGAAGAACCCCGCCACCGGCCTGCGCATGAGCAAGCTCGACAGCAGCGGCGTCTATGAAAGCCGCTTCGGCTTCAAGGGCAGCGAAGACCTGGGCGGCGGCTACAAGGCCAACTTCCAGCTCGAGTCAGGTTTCGCGATGGACAGCGGCGGCGCCCCCGCCCTGTCGTTCACGCGCCAGTCCTGGGTCGGCATCTCGGGCGGCTTCGGTGACCTGCGCTTCGGCAAGGCCTGGAGCGCGTTCGACGACATCAGCGGCACGGCGCTGGCGGCCAAGAACTCGGTGCTCGCGCCCAACCAGGGCGCGTGGCTGAGCACCTCGTACAAGGACGCGCCGAACAACGGCGTCTACTACGCCTCGCCCAACTTCGGCGGCTTCAGCGGCGTGGTGAGCTACGGCACCGGCGAGAACAAGACCGCCGCCGATGGCGCCGGCTCGATCACCAGCGTGCACGTCAAGTACGCGGGCGGCCCGGTGTTCGCCGGCGTCGCTTTCCAGAACGAGAAGGCCACGAGCAATTCCACGGCGATCAAGTTCACGCGCGTCAACGGCTCGTACGACTTCGGCCCCGCCAAGCTGCTGGCCAGCTACGGCCGCGTGGCCTACGGCGCGGACGACACCAAGGAATGGACCATCGCCGCCGACGTGCCCCTGGCCGGTGGCTGGCTGCTGTCGGGCGGTATCGCGCAGTCCAAGGGCTCGGTCACGGGCTTCGTGGGCGACCCCAACTACACGGGCAAGCTGGTCACCACGGTGGCGCCCGGCGCGCCGGACGTCAAGCGCACGGGCTGGAGCGTGGCGGCCTTCTACAGCCTGAGCAAGCGCACCACGCTGTACGGCGGCTACCGCGCCAACACCATCAAGACGCCGGGCGCCGCCGACCAGGACGGCAGCGTGCTGGGCGTGGGCATGTACCACCTGTTCTGA
PROTEIN sequence
Length: 344
MKKSILLISATLATGAAMAQSSVTLYGLADMYLSSQKNPATGLRMSKLDSSGVYESRFGFKGSEDLGGGYKANFQLESGFAMDSGGAPALSFTRQSWVGISGGFGDLRFGKAWSAFDDISGTALAAKNSVLAPNQGAWLSTSYKDAPNNGVYYASPNFGGFSGVVSYGTGENKTAADGAGSITSVHVKYAGGPVFAGVAFQNEKATSNSTAIKFTRVNGSYDFGPAKLLASYGRVAYGADDTKEWTIAADVPLAGGWLLSGGIAQSKGSVTGFVGDPNYTGKLVTTVAPGAPDVKRTGWSVAAFYSLSKRTTLYGGYRANTIKTPGAADQDGSVLGVGMYHLF*