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scnpilot_p_inoc_scaffold_1334_curated_11

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(10873..11508)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LuxR family n=1 Tax=Variovorax paradoxus B4 RepID=T1XE70_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 73.5
  • Coverage: 204.0
  • Bit_score: 299
  • Evalue 2.80e-78
transcriptional regulator, LuxR family similarity KEGG
DB: KEGG
  • Identity: 73.5
  • Coverage: 204.0
  • Bit_score: 299
  • Evalue 8.80e-79
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:AGU51222.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.5
  • Coverage: 204.0
  • Bit_score: 299
  • Evalue 3.90e-78

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 636
ATGAACGCCCCCGACACGCCCATCCGCATCCTGCTCGTCGATGACCACCCCATGGTGCGCGAGGGCCTGCGCGCGCGCCTGTCCAGCGTGCCGCGCCTGCAGGTGGTGGGCGAGGCGGGCGACGCCGCCGAGGCCCTGCGCCAGCTCGAACTGAGCCTGCCCGACGTGGTGCTGCAGGACGTGGGCCTGAAGGACGGCAACGGCATCGACCTGGTGCAGGCCATGCTGGCGCATCAGCCCACGCTGCGCGTGCTGATGTTCAGCATGTACGACAACCCCGAGTACGTGCAGCGCGCCTTGCTGGCGGGCGCGCGCGGCTACGTGCTCAAGGAAACGCCGGCCGAGGAGGTGCTGGCCGCCATCGACGCCGTGGTGGCGGGTGGCACCTTCCTCAGCCCCGCCGTCTCGCGCCGCCTGTTCCGCGGCCAGGCGCCGCGGCCCATGCTCACGCCGCGCGAAAGCCAGATCCTCAGCGCCCTGGGCCGCGGCGAATCGAGCAAGCAGATCGCCCAGGCCATGCACCTGAGCGTGCGCACCGTCGAGGCGCACCGCCAGAGCATCAAGCGCAAGCTGGGCATCGAGGGCCAGGCCGAGCTCATCAAGTACGCGGTGGAGCACGCGCGCGAAGCGCCCTGA
PROTEIN sequence
Length: 212
MNAPDTPIRILLVDDHPMVREGLRARLSSVPRLQVVGEAGDAAEALRQLELSLPDVVLQDVGLKDGNGIDLVQAMLAHQPTLRVLMFSMYDNPEYVQRALLAGARGYVLKETPAEEVLAAIDAVVAGGTFLSPAVSRRLFRGQAPRPMLTPRESQILSALGRGESSKQIAQAMHLSVRTVEAHRQSIKRKLGIEGQAELIKYAVEHAREAP*