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scnpilot_p_inoc_scaffold_2741_curated_10

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 11053..11877

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 274.0
  • Bit_score: 498
  • Evalue 7.50e-138
shikimate 5-dehydrogenase (EC:1.1.1.25); K00014 shikimate dehydrogenase [EC:1.1.1.25] similarity KEGG
DB: KEGG
  • Identity: 64.9
  • Coverage: 276.0
  • Bit_score: 342
  • Evalue 1.20e-91
Shikimate dehydrogenase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKJ7_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 90.9
  • Coverage: 274.0
  • Bit_score: 498
  • Evalue 5.30e-138

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 825
ATGACCGACCGCTACGCCGTCATCGGCCACCCGATCTCGCACAGCAAGTCCCCGCAGATCCACGCCGCCTTCGCCCAGGCCACCGGGCAGGACATCGACTACACCGCCATCGAGGCGCCGCTGGACGGCTTCGCGGCCACGCTGCGGGCCTTTCGCGAACAGGGCGGGCGCGGTGCCAACGTCACCCTGCCCTTCAAGCTGCAGGCCTGCGAACTGGCCACCGACCCGAGCGAGGCCGCGCGCCTGGCCGGTGCGGCCAACGCCCTGCGCTTCGAGCCGGGCGATCGCATCCGCGCCGAGAATTTCGACGGCGTCGGCCTGGTCAATGACATCCAGCGCAACCTGGGCCACGCGCTCAAGGGCCGGCGCGTGCTGCTGCTGGGCGCGGGCGGCGCCACGCGCGGCGCGCTGCTGCCCCTGGCGCAACAGGGCCCGGCCGCGCTGGCCGTGGCCAACCGCACGGCCGACAAGGCGCACGCGCTGCGCGCCGATTTCGCCGCCCACGCCACGCTGCAGAGCGGCGGCTACGCGGACCTCGCGGGCGAGCGCTTCGACGTGGTGATCAACGCCACCTCGGCCGGCCTGTCCGGCGAGGCCCTGCCCCTGCCCGGCGGCCTGTTCGCGCCCGGCGCCCTCGCCTACGACATGGTCTACGGCAAGGGCCTGACCCCGTTCCTGCGGCAGGCGCGCGAGGCCGGGGTGCACGCGCTGGCCGACGGCGTGGGCATGCTGGTGGAACAGGCGGCCGAGGCCTTCGCCTGGTGGCGCGGCGTGCGCCCGGGCACGCGCGAGGTGATCGCACGGCTGTCGGTGCCGCTGGTTTAA
PROTEIN sequence
Length: 275
MTDRYAVIGHPISHSKSPQIHAAFAQATGQDIDYTAIEAPLDGFAATLRAFREQGGRGANVTLPFKLQACELATDPSEAARLAGAANALRFEPGDRIRAENFDGVGLVNDIQRNLGHALKGRRVLLLGAGGATRGALLPLAQQGPAALAVANRTADKAHALRADFAAHATLQSGGYADLAGERFDVVINATSAGLSGEALPLPGGLFAPGALAYDMVYGKGLTPFLRQAREAGVHALADGVGMLVEQAAEAFAWWRGVRPGTREVIARLSVPLV*