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scnpilot_p_inoc_scaffold_2741_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2741_curated_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..533
DNA (531bp) protein (177aa)
Glycine dehydrogenase (decarboxylating) {ECO:0000256|HAMAP-Rule:MF_00711}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00711};; Glycine cleavage system P-protein {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine decarboxylase {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|HAMAP-Rule:MF_00711}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
gcvP; Glycine cleavage system P-protein; K00281 glycine dehydrogenase [EC:1.4.4.2]
Glycine dehydrogenase (decarboxylating) n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKK7_9BURK
scnpilot_p_inoc_scaffold_2741_curated_2
unknown

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comp(585..2309)
DNA (1725bp) protein (575aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_2741_curated_3
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2329..2826)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6YDA3_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO89510.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
scnpilot_p_inoc_scaffold_2741_curated_4
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2823..5723)
DNA (2901bp) protein (967aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21VK9_RHOFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD70194.1}; Flags: Precursor;; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
scnpilot_p_inoc_scaffold_2741_curated_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5836..6807
DNA (972bp) protein (324aa)
Transcriptional regulator, LuxR family n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CQ47_VARPS
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACS21619.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
scnpilot_p_inoc_scaffold_2741_curated_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6866..8803
DNA (1938bp) protein (646aa)
Radical SAM domain containing protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKK5_9BURK
Radical SAM domain containing protein {ECO:0000313|EMBL:EIK89745.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2741_curated_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8829..9071
DNA (243bp) protein (81aa)
Bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKK0_9BURK
Bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta {ECO:0000313|EMBL:EIK89740.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
glutaredoxin, GrxC family protein
scnpilot_p_inoc_scaffold_2741_curated_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9166..10275
DNA (1110bp) protein (370aa)
Mechanosensitive ion channel family protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKJ9_9BURK
Mechanosensitive ion channel family protein {ECO:0000313|EMBL:EIK89739.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
mechanosensitive ion channel family protein
scnpilot_p_inoc_scaffold_2741_curated_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10295..10960)
DNA (666bp) protein (222aa)
DSBA oxidoreductase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKJ8_9BURK
DSBA oxidoreductase {ECO:0000313|EMBL:EIK89738.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
DSBA oxidoreductase
scnpilot_p_inoc_scaffold_2741_curated_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11053..11877
DNA (825bp) protein (275aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
shikimate 5-dehydrogenase (EC:1.1.1.25); K00014 shikimate dehydrogenase [EC:1.1.1.25]
Shikimate dehydrogenase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKJ7_9BURK
scnpilot_p_inoc_scaffold_2741_curated_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11908..12366
DNA (459bp) protein (153aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
aroQ; 3-dehydroquinate dehydratase; K03786 3-dehydroquinate dehydratase II [EC:4.2.1.10]
3-dehydroquinate dehydratase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKJ6_9BURK
scnpilot_p_inoc_scaffold_2741_curated_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12363..13253
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKJ5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK89735.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2741_curated_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13210..14388)
DNA (1179bp) protein (393aa)
Transporter n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKJ4_9BURK
Transporter {ECO:0000313|EMBL:EIK89734.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
transporter; K05820 MFS transporter, PPP family, 3-phenylpropionic acid transporter
scnpilot_p_inoc_scaffold_2741_curated_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(14381..15481)
DNA (1101bp) protein (367aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5]
Chorismate synthase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKJ3_9BURK
scnpilot_p_inoc_scaffold_2741_curated_15
Xenorhabdus bovienii, Xenorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15619..16257)
DNA (639bp) protein (213aa)
Chloramphenicol acetyltransferase {ECO:0000313|EMBL:CDH31684.1}; EC=2.3.1.28 {ECO:0000313|EMBL:CDH31684.1};; TaxID=1379677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Xenorhabdus.;" source="Xenorhabdus bovienii str. Intermedium.;"
chloramphenicol acetyltransferase; K00638 chloramphenicol O-acetyltransferase [EC:2.3.1.28]
Chloramphenicol acetyltransferase n=1 Tax=Xenorhabdus bovienii (strain SS-2004) RepID=D3UY84_XENBS
Displaying 15 items

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