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scnpilot_p_inoc_scaffold_1372_curated_7

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 7226..7855

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L25 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MHY8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 98.1
  • Coverage: 209.0
  • Bit_score: 409
  • Evalue 1.90e-111
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00147491}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023359}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.1
  • Coverage: 209.0
  • Bit_score: 409
  • Evalue 2.70e-111
50S ribosomal protein L25/general stress protein Ctc; K02897 large subunit ribosomal protein L25 similarity KEGG
DB: KEGG
  • Identity: 64.9
  • Coverage: 211.0
  • Bit_score: 272
  • Evalue 8.70e-71

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
ATGCAATTCGTCGCTTTCGAGCGCGCCAAGCAGGGCACGGGTGCGAGCCGCCGCCTGCGCATCACCGGTCGCGCGCCCGGTATCGTTTTTGGTGGCACCACCGCCCCCGTCTCGATCGAACTCGATCACAACGCGCTGTGGCACGCCCTCAAGAAGGAAGCTTTCCACGCCTCCATCCTCGACATGGAGCTCAACGGCAAGGTCGAGAAGGTCCTGCTGCGCGATGTGCAATACCACCCGTTCAAGCCGCAGGTGCTGCACGTCGACTTCCAGCGCGTGGACGACAAGACCCGCCTGCGCAAGAAGGTGCCGCTGCACTTCACCGGTGCCGAAGAGTCGCCGGCCGTCAAGCTCGACAAGTGCCTGGTCAACCACGTGATCAACGACATCGAGATCGAGTGCCTGGCCACCCAGCTGCCCGAGCACATCACCGTGGACCTGAGCCAGGTCACCAAGGGTGCCACCGTGCACGCCGGCGACATCAAGCTGCCCAAGGGCGTGAAGATCGTCACCCACGGCCGCAAGGACATCACCGTCGCCACGGTGGTGGAGCCGGTGGAAGAAGTGGTGGCCGCACCGGTGGCCGCCGCTCCCGCCGACGACAAGAAGAAGGGCAAGGGCAAGAAGTAA
PROTEIN sequence
Length: 210
MQFVAFERAKQGTGASRRLRITGRAPGIVFGGTTAPVSIELDHNALWHALKKEAFHASILDMELNGKVEKVLLRDVQYHPFKPQVLHVDFQRVDDKTRLRKKVPLHFTGAEESPAVKLDKCLVNHVINDIEIECLATQLPEHITVDLSQVTKGATVHAGDIKLPKGVKIVTHGRKDITVATVVEPVEEVVAAPVAAAPADDKKKGKGKK*