ggKbase home page

scnpilot_p_inoc_scaffold_1372_curated_8

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 8003..8653

Top 3 Functional Annotations

Value Algorithm Source
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.7
  • Coverage: 221.0
  • Bit_score: 404
  • Evalue 1.20e-109
peptidyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] similarity KEGG
DB: KEGG
  • Identity: 73.9
  • Coverage: 207.0
  • Bit_score: 328
  • Evalue 1.80e-87
Peptidyl-tRNA hydrolase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MHY7_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 221.0
  • Bit_score: 404
  • Evalue 8.30e-110

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 651
ATGATCAAGCTCATCGCCGGCCTGGGCAACCCGGGCCCCGAGTACGAACAGACGCGGCACAACGCCGGCTTCTGGTGGGTGGACGAGGCCGCGCGCCTGCTCAAGGTCTCGCTGCAGATGGAGCGCTCGCACTTCGGCCTGGTGGCGCGCGCCAACGTGGGCGGCCAGACGGTCTGGCTGGTCGAGCCGCAGACCTTCATGAACCTCTCGGGCAAATCGGTGGGCTCGCTGGCGCGCTTCTACAAGATCGCGCCCGAGGAGGTGCTGGTGGTGCACGACGAGCTGGACCTGCCCCCCGGCGAGGCCAAGCTCAAGAAGGGCGGCGGCCACGCGGGCCACAACGGCCTGCGCGATATCCACGCGCAGCTGGGCAGCGCCGACTACTGGCGCCTGCGCATCGGCATCGGCCACCCGGGCAACAAGAACGAGGTGGCGAACTGGGTGCTCAAGAAGCCCTCGCCCGACGACCGCATCGCCATCGCGCAGGCGCTGGACCGCTGCCTCAAGGCCCTGCCCCAACTCATCGCGGGCGAAATGGACAAGGCCACCGCCCTGATCCACACCAGCAAGCCGCCCCGGCCGAAGCCGCCGCGGCCCGCCGCGCCGCCTCAGGCCGGTGGTGCCTCACCCGAGGCCGACGACAAGCCCTGA
PROTEIN sequence
Length: 217
MIKLIAGLGNPGPEYEQTRHNAGFWWVDEAARLLKVSLQMERSHFGLVARANVGGQTVWLVEPQTFMNLSGKSVGSLARFYKIAPEEVLVVHDELDLPPGEAKLKKGGGHAGHNGLRDIHAQLGSADYWRLRIGIGHPGNKNEVANWVLKKPSPDDRIAIAQALDRCLKALPQLIAGEMDKATALIHTSKPPRPKPPRPAAPPQAGGASPEADDKP*