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scnpilot_p_inoc_scaffold_2199_curated_11

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(15114..15731)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 179.0
  • Bit_score: 360
  • Evalue 1.40e-96
def; peptide deformylase; K01462 peptide deformylase [EC:3.5.1.88] similarity KEGG
DB: KEGG
  • Identity: 78.0
  • Coverage: 191.0
  • Bit_score: 301
  • Evalue 1.70e-79
Peptide deformylase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSJ7_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 179.0
  • Bit_score: 360
  • Evalue 1.00e-96

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGCGCCGAGGCATTGCCCATTTCCACCCCTCCAACGGGCCCCGCGCCCAATGGCCCCGTTGCTTGTTCGTCATTGCCATGACCATTCATGCCATCCTGAAAATGGGCGATCCGCGCCTGCTGCGCCACGCCCAGCCCGTCACCGCCTTCGACACGCCCGAGCTGCACCGGCTGGTGGCCGACCTCAAGGACACCATGGCCGACGCCAACGGCGCGGGCCTGGCGGCGCCGCAGATCGGCGTGGACCTGCAGGTTGTCATCTTTGGCAGCGGCGCGCCCAACCCGCGCTACCCGGACGCGCCGGTGGTTCCGCGCACCACGCTGATCAATCCGGTCATCACGCCTTTGGGCGACGAAGAGGAAGAGGGCTGGGAAGGTTGCCTGTCGGTGCCCGGGCTGCGCGGCGTGGTGCCGCGCTGGCGGCGCATCCGCTACCAGGGCTTCGACGAATTCGGGCAGGCGATCGTGCGCGAGGCCGAGGGCTTTCATGCGCGCGTGGTGCAGCACGAGTGCGACCACCTCTGGGGCACGCTGTACCCCATGCGGGTGCGCGACTTCCGCCGCTTCGGCTTCACCGAGGTGCTGTTCCCGGGGCTGGACGCCAGTGACGACGACTGA
PROTEIN sequence
Length: 206
MRRGIAHFHPSNGPRAQWPRCLFVIAMTIHAILKMGDPRLLRHAQPVTAFDTPELHRLVADLKDTMADANGAGLAAPQIGVDLQVVIFGSGAPNPRYPDAPVVPRTTLINPVITPLGDEEEEGWEGCLSVPGLRGVVPRWRRIRYQGFDEFGQAIVREAEGFHARVVQHECDHLWGTLYPMRVRDFRRFGFTEVLFPGLDASDDD*