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scnpilot_p_inoc_scaffold_2199_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2199_curated_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..703)
DNA (702bp) protein (234aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Trigger factor n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSH2_9BURK
tig; trigger factor; K03545 trigger factor
scnpilot_p_inoc_scaffold_2199_curated_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(961..1623)
DNA (663bp) protein (221aa)
Asp/Glu racemase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSH3_9BURK
Asp/Glu racemase {ECO:0000313|EMBL:EIK92163.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Asp/Glu racemase
scnpilot_p_inoc_scaffold_2199_curated_3
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1620..4214)
DNA (2595bp) protein (865aa)
TRAP transporter, 4TM/12TM fusion protein id=1266390 bin=GWE1_Burkholderiales_65_30 species=Thauera sp. 63 genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
TRAP transporter 4TM/12TM fusion protein
Tax=GWE1_Burkholderiales_65_30_curated
scnpilot_p_inoc_scaffold_2199_curated_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4309..5286)
DNA (978bp) protein (326aa)
TRAP transporter solute receptor TAXI family protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSH5_9BURK
TRAP transporter solute receptor TAXI family protein {ECO:0000313|EMBL:EIK92165.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
TRAP transporter solute receptor TAXI family protein; K07080
scnpilot_p_inoc_scaffold_2199_curated_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5441..6793)
DNA (1353bp) protein (451aa)
Acetylornithine transaminase {ECO:0000313|EMBL:EIK92166.1}; EC=2.6.1.- {ECO:0000313|EMBL:EIK92166.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein; K00837 [EC:2.6.1.-]
Acetylornithine transaminase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSH6_9BURK
scnpilot_p_inoc_scaffold_2199_curated_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6984..8309
DNA (1326bp) protein (442aa)
D-amino-acid dehydrogenase (EC:1.4.99.1); K00285 D-amino-acid dehydrogenase [EC:1.4.99.1]
D-amino-acid dehydrogenase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSH7_9BURK
D-amino-acid dehydrogenase {ECO:0000313|EMBL:EIK92167.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_2199_curated_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8269..9168)
DNA (900bp) protein (300aa)
LysR family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSH8_9BURK
LysR family transcriptional regulator {ECO:0000313|EMBL:EIK92168.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_2199_curated_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9204..12389)
DNA (3186bp) protein (1062aa)
Acriflavin resistance protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSH9_9BURK
Acriflavin resistance protein {ECO:0000313|EMBL:EIK92169.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
acriflavin resistance protein
scnpilot_p_inoc_scaffold_2199_curated_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12391..13515)
DNA (1125bp) protein (375aa)
RND family efflux transporter MFP subunit n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSI0_9BURK
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:EIK92170.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
RND family efflux transporter MFP subunit
scnpilot_p_inoc_scaffold_2199_curated_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13512..14972)
DNA (1461bp) protein (487aa)
Outer membrane channel (Fragment) n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSI1_9BURK
Outer membrane channel {ECO:0000313|EMBL:EIK92171.1}; Flags: Fragment;; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
NodT family RND efflux system outer membrane lipoprotein
scnpilot_p_inoc_scaffold_2199_curated_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15114..15731)
DNA (618bp) protein (206aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
def; peptide deformylase; K01462 peptide deformylase [EC:3.5.1.88]
Peptide deformylase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSJ7_9BURK
scnpilot_p_inoc_scaffold_2199_curated_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15992..16309
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSJ6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK92186.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2199_curated_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16299..18398)
DNA (2100bp) protein (700aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
DNA ligase (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2]
DNA ligase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTF9_9BURK
scnpilot_p_inoc_scaffold_2199_curated_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18404..19561)
DNA (1158bp) protein (386aa)
Cell division protein ZipA n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTF8_9BURK
Cell division protein ZipA {ECO:0000256|RuleBase:RU003612}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
ZipA FtsZ-binding region protein
scnpilot_p_inoc_scaffold_2199_curated_15
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19575..22742)
DNA (3168bp) protein (1056aa)
Chromosome partition protein Smc n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTF7_9BURK
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
smc; chromosome segregation protein; K03529 chromosome segregation protein
Displaying 15 items

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