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scnpilot_p_inoc_scaffold_2210_curated_8

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(6401..7438)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 345.0
  • Bit_score: 651
  • Evalue 6.70e-184
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] similarity KEGG
DB: KEGG
  • Identity: 60.8
  • Coverage: 339.0
  • Bit_score: 384
  • Evalue 4.40e-104
Pseudouridine synthase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MP52_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 92.8
  • Coverage: 345.0
  • Bit_score: 651
  • Evalue 4.70e-184

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1038
ATGGCGCTGGAACAGGACTCGTTGAACGAAGCGGACAGTATATCGGCCGGGGGTGTGGCGCCCGAGGGCGAGCCCTGGGACGAACAGGCCGAGCAGCGCCGCCACGAGGTCCCCGCCGGGCTACACGGCTGGCGGTTGGACCGTGCGCTGGCCGCGCTGGTGCCCGAGTTCTCCCGCTCCTACCTGCAGCAGCTGCTGGCCGACGGCGGCGTGCTCTGGCGCGAGCGCGCCTGCACCAAGGCCGCCACGCGCGTGTCGGCGGGCGACACGGTGGTGGTCACGTTGCGGCCCACGCCGCAGGCGCGCGCCTTCGTGGCCGAGCCCATGGCGCTGGACCTGGTGTTCGAGGACGAGCACCTGCTGGTCATCGACAAGCCCGCCGGCCTGGTGGTGCACCCGGCGGCCGGGCACTGGGGCGGCACGCTGCTCAACGGCCTGCTCGCGCACCACGCGGGCGCCGCCGCGCTGCCGCGCGCGGGCATCGTGCACCGGCTCGACAAGGACACCTCGGGTCTGATGATGGTCGCCAAGTCGCGCCCCGCCATGCAGGCGCTGGTGAGCGCCATCGCGGCCCGCGAGGTGGGGCGCCAGTACCTGGCCATCGCGCACGGCGCCTGGCGCCACGAGGGCCTGCGCACGGTGCACGAGCCCATCGGTCGCGACCCCCGCAACCGCCTGCGCATGGCGGTGGTGGGCGAGGGCGCGGGCAAGCCGGCGCAGAGCGATTTCCTTGCCCTCGACCGCTGCGCTGAGGCCATGCTGGTGGCCTGCAAGCTGCACACCGGGCGCACGCACCAGATCCGCGTGCACATGGCCTGGCTGGGCCATCCGCTGGTGGGCGACACGCTGTACGGCGGCCGGCCGCTCTGGGGCCTGCAGCGCCAGGCGCTGCACGCGGCGTCCCTGCGCCTGTCGCACCCGGTTTCCGGGGCGCCGCTGGCCTTCTGGCGCGACCCGCCCGAGGACCTGTCGGCCGCCTTGGCCGCCGGGGGGCTCCGGTACAATCCGCCCCCTGCCGGCCAGGGCCTGATCGACTGA
PROTEIN sequence
Length: 346
MALEQDSLNEADSISAGGVAPEGEPWDEQAEQRRHEVPAGLHGWRLDRALAALVPEFSRSYLQQLLADGGVLWRERACTKAATRVSAGDTVVVTLRPTPQARAFVAEPMALDLVFEDEHLLVIDKPAGLVVHPAAGHWGGTLLNGLLAHHAGAAALPRAGIVHRLDKDTSGLMMVAKSRPAMQALVSAIAAREVGRQYLAIAHGAWRHEGLRTVHEPIGRDPRNRLRMAVVGEGAGKPAQSDFLALDRCAEAMLVACKLHTGRTHQIRVHMAWLGHPLVGDTLYGGRPLWGLQRQALHAASLRLSHPVSGAPLAFWRDPPEDLSAALAAGGLRYNPPPAGQGLID*