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scnpilot_p_inoc_scaffold_1850_curated_5

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 5511..5777

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S15 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MHE3_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 97.7
  • Coverage: 88.0
  • Bit_score: 172
  • Evalue 1.70e-40
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.7
  • Coverage: 88.0
  • Bit_score: 172
  • Evalue 2.30e-40
rpsO; 30S ribosomal protein S15 similarity KEGG
DB: KEGG
  • Identity: 87.5
  • Coverage: 88.0
  • Bit_score: 156
  • Evalue 5.10e-36

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 267
ATGATCGATCAGCAAGTCAAGGCCGGCGTCATCGCCGACAACGCCCGTTCCGCCAACGACACCGGCAGCCCCGAGGTCCAGGTCGCCATCCTGACGGCCCGCATCAACGAACTCACCCCGCACTTCAAGACGCACGCCAAGGACCACCATGGCCGCCGCGGCCTGTTGCGCATGGTGAGCCGTCGCCGCAAGCTGCTGGACTACCTCAAGTCCAAGGACGCCGACCGTTACCTGGCCCTGATCCAGAAACTGGGCCTGCGCAAGTAA
PROTEIN sequence
Length: 89
MIDQQVKAGVIADNARSANDTGSPEVQVAILTARINELTPHFKTHAKDHHGRRGLLRMVSRRRKLLDYLKSKDADRYLALIQKLGLRK*