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scnpilot_p_inoc_scaffold_1850_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1850_curated_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(248..1498)
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MHE7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK88637.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
ANTAR domain-containing protein with unknown sensor
scnpilot_p_inoc_scaffold_1850_curated_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1529..2656
DNA (1128bp) protein (376aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=795665 species="Bacteria; Proteobacteria; Betaprot
gcp; O-sialoglycoprotein endopeptidase; K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57]
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MHE6_9BURK
scnpilot_p_inoc_scaffold_1850_curated_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2783..4069
DNA (1287bp) protein (429aa)
Putative transporter signal peptide protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MHE5_9BURK
Putative transporter signal peptide protein {ECO:0000313|EMBL:EIK88635.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
putative transporter signal peptide protein; K01999 branched-chain amino acid transport system substrate-binding protein
scnpilot_p_inoc_scaffold_1850_curated_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4193..5377
DNA (1185bp) protein (395aa)
Aspartate aminotransferase {ECO:0000313|EMBL:EIK88634.1}; EC=2.6.1.- {ECO:0000313|EMBL:EIK88634.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
aspartate aminotransferase (EC:2.6.1.1)
Aspartate aminotransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MHE4_9BURK
scnpilot_p_inoc_scaffold_1850_curated_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5511..5777
DNA (267bp) protein (89aa)
30S ribosomal protein S15 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MHE3_9BURK
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
rpsO; 30S ribosomal protein S15
scnpilot_p_inoc_scaffold_1850_curated_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6022..8235
DNA (2214bp) protein (738aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Polyribonucleotide nucleotidyltransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MHE2_9BURK
scnpilot_p_inoc_scaffold_1850_curated_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8255..9244
DNA (990bp) protein (330aa)
NAD(P)h quinone oxidoreductase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MHE1_9BURK
NAD(P)h quinone oxidoreductase {ECO:0000313|EMBL:EIK88631.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Zeta-crystallin
scnpilot_p_inoc_scaffold_1850_curated_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9249..9995
DNA (747bp) protein (249aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Triosephosphate isomerase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MHE0_9BURK
triosephosphate isomerase-like
scnpilot_p_inoc_scaffold_1850_curated_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10054..10476
DNA (423bp) protein (141aa)
Preprotein translocase subunit SecG n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MHD9_9BURK
Preprotein translocase subunit SecG {ECO:0000313|EMBL:EIK88629.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
preprotein translocase subunit SecG; K03075 preprotein translocase subunit SecG
scnpilot_p_inoc_scaffold_1850_curated_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10765..11124
DNA (360bp) protein (120aa)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NUO1 {ECO:0000256|HAMAP-Rule:MF_01394}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
NADH-ubiquinone/plastoquinone oxidoreductase subunit 3; K00330 NADH-quinone oxidoreductase subunit A [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit A n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MHD8_9BURK
scnpilot_p_inoc_scaffold_1850_curated_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11161..11640
DNA (480bp) protein (160aa)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
NADH dehydrogenase subunit B (EC:1.6.99.3); K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit B n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MHD7_9BURK
scnpilot_p_inoc_scaffold_1850_curated_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11669..12289
DNA (621bp) protein (207aa)
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; NADH dehydrogenase I subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; NDH-1 subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
NADH (or f420h2) dehydrogenase, subunit c; K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit C n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MHD6_9BURK
scnpilot_p_inoc_scaffold_1850_curated_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12309..13562
DNA (1254bp) protein (418aa)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
NADH dehydrogenase subunit D (EC:1.6.5.3); K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit D n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MHD5_9BURK
scnpilot_p_inoc_scaffold_1850_curated_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13559..14065
DNA (507bp) protein (169aa)
NADH-quinone oxidoreductase subunit E; K00334 NADH-quinone oxidoreductase subunit E [EC:1.6.5.3]
Nadh-quinone e subunit n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MHD4_9BURK
Nadh-quinone e subunit {ECO:0000313|EMBL:EIK88624.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_1850_curated_15
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14065..15426
DNA (1362bp) protein (454aa)
NADH-quinone oxidoreductase subunit F {ECO:0000313|EMBL:EIK88623.1}; EC=1.6.5.3 {ECO:0000313|EMBL:EIK88623.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
NADH-quinone oxidoreductase subunit F (EC:1.6.99.5); K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit F n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MHD3_9BURK
scnpilot_p_inoc_scaffold_1850_curated_16
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15452..16081
DNA (630bp) protein (210aa)
NADH dehydrogenase subunit G {ECO:0000313|EMBL:EIK88622.1}; EC=1.6.5.3 {ECO:0000313|EMBL:EIK88622.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
NADH dehydrogenase subunit G; K00336 NADH-quinone oxidoreductase subunit G [EC:1.6.5.3]
NADH dehydrogenase subunit G n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MHD2_9BURK
Displaying 16 items

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