ggKbase home page

scnpilot_p_inoc_scaffold_1435_curated_22

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(20196..20813)

Top 3 Functional Annotations

Value Algorithm Source
tRNA 2-thiocytidine biosynthesis protein TtcA n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRC5_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 206.0
  • Bit_score: 364
  • Evalue 5.30e-98
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000256|HAMAP-Rule:MF_01850}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 206.0
  • Bit_score: 364
  • Evalue 7.40e-98
C32 tRNA thiolase; K14058 tRNA 2-thiocytidine biosynthesis protein TtcA similarity KEGG
DB: KEGG
  • Identity: 76.2
  • Coverage: 189.0
  • Bit_score: 297
  • Evalue 2.50e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
GTCAAGCGCGTGATCCCCGAGGGCAAGACCCTGTGCAGCCTGTGCAGCCGGCTGCGCCGCGGCATCCTCTACCGCGTGGCCGACGAACTCGGCGCCACCAAGATCGCGCTCGGCCACCACCGCGACGACATCCTGCAGACCCTGCTGCTCAACCTGTTCTTCGGCGCCAAGCTCAAGGGCATGCCGGCCAAGCTGGTGAGCGACGACGGCAAGCACGTGGTGATCCGCCCCCTGGCCTACGTGCCCGAGAAAGACCTGGTGCGCTGGGCCGAGCTGCGCCAGTTCCCCATCATTCCCTGCACCCTGTGCGGCAGCCAGGAAAACCTGCAGCGCAAGCAGGTGGGCAACCTGCTGCGCGAGTGGGAGAAGAAGTACCCCGGCCGGGTGGAGAACATGGCCAGCGCGCTGCAGAACGTGGTGCCCAGCCACCTGATGGACCGCGCGCTGTTTCCGTTTGAAACGCTGCGCGCCACCGGCGTGCCGGACGACAGCGGCGACAAGGCCTTCGACGACGAGCCCGTGGCCGCGCCGGCCGCCGAGGCCTGCGCCGCGCCCGCGCCGCAGGGGAACCCGGCCGCGCCGCGCGCGGTCATACCCATCGCCACCGAAGCCAGCTGA
PROTEIN sequence
Length: 206
VKRVIPEGKTLCSLCSRLRRGILYRVADELGATKIALGHHRDDILQTLLLNLFFGAKLKGMPAKLVSDDGKHVVIRPLAYVPEKDLVRWAELRQFPIIPCTLCGSQENLQRKQVGNLLREWEKKYPGRVENMASALQNVVPSHLMDRALFPFETLRATGVPDDSGDKAFDDEPVAAPAAEACAAPAPQGNPAAPRAVIPIATEAS*