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scnpilot_p_inoc_scaffold_1435_curated

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1435_curated_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..350
DNA (348bp) protein (116aa)
Putative iron-sulfur cluster insertion protein ErpA n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRA5_9BURK
Putative iron-sulfur cluster insertion protein ErpA {ECO:0000256|HAMAP-Rule:MF_01380}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Fe-S protein; K15724 iron-sulfur cluster insertion protein
scnpilot_p_inoc_scaffold_1435_curated_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(435..1847)
DNA (1413bp) protein (471aa)
Peptidase M23B n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRA6_9BURK
Peptidase M23B {ECO:0000313|EMBL:EIK91746.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
peptidase M23B
scnpilot_p_inoc_scaffold_1435_curated_3
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2055..3317
DNA (1263bp) protein (421aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02007}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
tyrosyl-tRNA ligase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRA7_9BURK
scnpilot_p_inoc_scaffold_1435_curated_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3377..4063)
DNA (687bp) protein (229aa)
Ankyrin n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRA8_9BURK
Ankyrin {ECO:0000313|EMBL:EIK91748.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
ankyrin
scnpilot_p_inoc_scaffold_1435_curated_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4060..4560)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRA9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91749.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1435_curated_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4668..5306)
DNA (639bp) protein (213aa)
Two component transcriptional regulator LuxR n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRB0_9BURK
Two component transcriptional regulator LuxR {ECO:0000313|EMBL:EIK91750.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
two component LuxR family transcriptional regulator
scnpilot_p_inoc_scaffold_1435_curated_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5303..6763)
DNA (1461bp) protein (487aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Histidine kinase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRB1_9BURK
periplasmic sensor signal transduction
scnpilot_p_inoc_scaffold_1435_curated_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6817..7752
DNA (936bp) protein (312aa)
Cation diffusion facilitator family transporter n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRB2_9BURK
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EIK91752.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
cation diffusion facilitator family transporter
scnpilot_p_inoc_scaffold_1435_curated_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7749..8192
DNA (444bp) protein (148aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
d-tyrosyl-tRNA(tyr) deacylase; K07560 D-tyrosyl-tRNA(Tyr) deacylase [EC:3.1.-.-]
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRB3_9BURK
scnpilot_p_inoc_scaffold_1435_curated_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8230..10026
DNA (1797bp) protein (599aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRB4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91754.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1435_curated_11
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10058..10387)
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PFG9_CELJU
hypothetical protein; K09946 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE86308.1}; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio japonicus (strain Ueda107) (Pseudomonas fluorescens subsp.; cellulosa).;"
scnpilot_p_inoc_scaffold_1435_curated_12
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10477..10959)
DNA (483bp) protein (161aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Endoribonuclease YbeY n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRB5_9BURK
hypothetical protein; K07042 probable rRNA maturation factor
scnpilot_p_inoc_scaffold_1435_curated_13
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10959..11393)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRB6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91756.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1435_curated_14
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11422..12354)
DNA (933bp) protein (311aa)
PhoH-like protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRB7_9BURK
PhoH-like protein {ECO:0000313|EMBL:EIK91757.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
PhoH family protein; K06217 phosphate starvation-inducible protein PhoH and related proteins
scnpilot_p_inoc_scaffold_1435_curated_15
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12505..13080
DNA (576bp) protein (192aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRB8_9BURK
ruvA; Holliday junction ATP-dependent DNA helicase RuvA
scnpilot_p_inoc_scaffold_1435_curated_16
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13081..14139
DNA (1059bp) protein (353aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12]
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRB9_9BURK
scnpilot_p_inoc_scaffold_1435_curated_17
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14155..15255
DNA (1101bp) protein (367aa)
Sporulation domain-containing protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRC0_9BURK
Sporulation domain-containing protein {ECO:0000313|EMBL:EIK91760.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
sporulation domain-containing protein
scnpilot_p_inoc_scaffold_1435_curated_18
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15271..16416)
DNA (1146bp) protein (382aa)
Alanine racemase domain-containing protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRC1_9BURK
Alanine racemase domain-containing protein {ECO:0000313|EMBL:EIK91761.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
putative threonine aldolase
scnpilot_p_inoc_scaffold_1435_curated_19
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16400..17050)
DNA (651bp) protein (217aa)
phosphoglycerate mutase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1]
Phosphoglycerate mutase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRC2_9BURK
Phosphoglycerate mutase {ECO:0000313|EMBL:EIK91762.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
scnpilot_p_inoc_scaffold_1435_curated_20
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17107..19473
DNA (2367bp) protein (789aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRC3_9BURK
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:EIK91763.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
PAS/PAC sensor hybrid histidine kinase
scnpilot_p_inoc_scaffold_1435_curated_21
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19480..20142)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRC4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91764.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1435_curated_22
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20196..20813)
DNA (618bp) protein (206aa)
tRNA 2-thiocytidine biosynthesis protein TtcA n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRC5_9BURK
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000256|HAMAP-Rule:MF_01850}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
C32 tRNA thiolase; K14058 tRNA 2-thiocytidine biosynthesis protein TtcA
Displaying 22 items

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