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scnpilot_p_inoc_scaffold_2411_curated_3

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 1736..2233

Top 3 Functional Annotations

Value Algorithm Source
signal peptide protein id=12496633 bin=THIO_MID species=Herbaspirillum seropedicae genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 64.6
  • Coverage: 158.0
  • Bit_score: 199
  • Evalue 2.40e-48
signal peptide protein similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 160.0
  • Bit_score: 136
  • Evalue 1.00e-29
Signal peptide protein {ECO:0000313|EMBL:EOA04301.1}; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum frisingense GSF30.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.4
  • Coverage: 155.0
  • Bit_score: 136
  • Evalue 4.50e-29

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Taxonomy

Herbaspirillum frisingense → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 498
ATGTCCCGCTGTCACACCCCCATTCGCCGCACCCTGGCCGCCGCCAGCCTGTGTCTGGCCACGCTTCCCGCGCTCGCGCAAAGCAGCGCCACCTTCGGCGTCACGGCCACCGTGCTGGCCAGTTGCACGGTGGTCGGAGGCATCCCCCTGGCGTTCGGCATCGTGTCGCCCGGCGTGCAGGCCGACAGCAGCACCGTCGTCACCGCCACCTGCACCGTGGGCACGCCCTACAGCCTCTCGCTCGACGCCGGCACCGGCAGTGGCGCCACGGTGGCCGACCGGCGCATGACCAGTGGCACGGACACCCTGGCCTACCGCCTCTACCGCGACGCCGGGCGCACCCAGCTCTGGGGCGATGGCACCAACGGCACTGTGTTCAACAGCAGCACCGGCACCGGCCTGCTGCAGTCCTTCACCGTGTACGGTCGGGTCCCGTCCAGCGCCACCGCCACGGTGGGTGTCTACGCCGACACCATCACCGTGACCGCCACCTACTGA
PROTEIN sequence
Length: 166
MSRCHTPIRRTLAAASLCLATLPALAQSSATFGVTATVLASCTVVGGIPLAFGIVSPGVQADSSTVVTATCTVGTPYSLSLDAGTGSGATVADRRMTSGTDTLAYRLYRDAGRTQLWGDGTNGTVFNSSTGTGLLQSFTVYGRVPSSATATVGVYADTITVTATY*