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scnpilot_p_inoc_scaffold_2411_curated_5

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 2920..5214

Top 3 Functional Annotations

Value Algorithm Source
fimbrial biogenesis outer membrane usher protein; K07347 outer membrane usher protein id=12496635 bin=THIO_MID species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 43.0
  • Coverage: 637.0
  • Bit_score: 448
  • Evalue 1.00e-122
fimbrial biogenesis outer membrane usher protein; K07347 outer membrane usher protein similarity KEGG
DB: KEGG
  • Identity: 32.9
  • Coverage: 781.0
  • Bit_score: 308
  • Evalue 6.80e-81
Fimbrial biogenesis outer membrane usher protein {ECO:0000313|EMBL:ABM35469.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.9
  • Coverage: 781.0
  • Bit_score: 308
  • Evalue 3.10e-80

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Taxonomy

Polaromonas naphthalenivorans → Polaromonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2295
ATGCGGTGGCGCCGCGTTGAGGCCCTGCTGCTCACCCTCGGCCTGTGCGGCGCGATCACGCCCGCGCGCGCCGAACCCGCGCCGCGCCTGCTGGAGGTTTGGCTCAATGGCGAACGCGTCGACGGCTTCGCTCCCCTGATGGAGGATGACGGCCGCTGGTATGCCACGGCCGACACCCTGGCGCGCTGGCGCCTGCGCCCTGCCGATCCGCCGCGCACCATCGCCGGCGTGGCGCACCATGGTCTGCAGGACTGGTCGCCCCGCTTCGACAAGGCCCAGCAGCGGCTGGCGTTGCAGGCGCCGCCCGAGCAGTTCCTGGCCCAGCGCCTGCGCCTGGACGGTCGAACCGACAGCGAGGCGCCGCTGATGGAACCCCTGCCCGGCCTGGCCATGGACTACAGCGTCAACGCCGAACGCAGCGGCGGCCAGAGCAGCACCGCCGCCCTGCTCGACCTGCGCGGCTTCGGCTGGAGCACCGGCGGCCTGGCGCGCGCCAGCGGCGTGCTGCGCGCCGGCGCCAACCCGGCCGGACTGCCACGCTGGCAGCGGCTGGACACCAGCCTGCAGCACAGCGACCCCAGCGGCCTGTGGCGCGCCAGCCTGGGCGACGCCATCACCTGTGGCGGCGAGCTCGCGCCCGCGCTGCGCTTCGCTGGCGCGCAATACGGCACCGACTTCAGCCTGCGCCCCGACCTCGTCACCCAGCCCCTGCCCTCGGTGTCGGGCAGCGCGCAGGTGCCCAGCGGCGTGGACCTGCTGATCGACAACCGCCCCGTCGGCAGCGCCCAGGTGGGCCCGGGCAACTACACCCTGGACCAGCTGCCCGGCGTGACCGGCGCGGGCGAGATCCGCGTGGTGCAGCGCGACCTGCTGGGCGTGGAGCGCGTGCAGGTGGTGCCCTACTACAGCAGCCCGCGCCTGCTGCGCCAGGACCTGCGCGAGCACTGCGTGGAAGCCGGCGTGCTGCGCCGCGGCTACGCCTCGGCCAGCGACACCTACGGTGGCGGTTTTGTCGCCGGCAGCCTGCGCCACGGCCTCAGCGACACGCTCACCCTGCTGGGCCGCGCCGAGGTGGGCCAGGCCGTGCGCGCCGTGCACCTGGGCGCGCATTGGGTGGTGGCGGGCGCGGGCGTGCTCAGCCTGCAGCTCGGGCGCAGCCAGGCCGACGGCGCTGGCGCCGGCCAGCGCACGGCCATCGGCTTCGAGCGCGTGGCGCGCGCCGGTAGCCTGAGCGCCACGATCGAAACCGCCGGCACCGGCTTCCGCTCGCTCGATGGTGCTCGCCTGCCGCAGCGGCGCGCCACCCTGTTCGCCGGCACCAGCATCGGCCAGACCAGCGTGTCCGGTGGCCTGGTCTGGCAGCGCGGCGCGCAGGGGCAGGACACACGCGTGCTCACGGCCGGCCTGCAGCGCCGCCTGGGTGCGCACTGGCACGCGGGCCTGAGCCTGTACCGGCGCGACGGCCAGCTCAGCGCGGCCGTGCTGTTCACGCGCGCGTTGAGCCCCGACACCACGCTGGCCGCGCGCGCGCAGGCCGGTGGCGACGCCGGCCTCACCGTGCAGGCGCAGCGCAGCGAGCCCGACGCCGGCGGCCTGGGCTGGCGCCTGCAGGGGGGCAGCGACGCGCTGAGCGCCCTGGCCGGCGTGAGCTGGCTGGGCCCACTCGGCCGCGTGGAAGCGCAGGCCACGAAATGGCGCCACGACCCCGAGGCCCATCTGCGCGTCGCGGCGCAGGGCGGCGTGCTGTGGATCGGCGGCCAGCCCATGCTGGGCCGCACCATCGGCGAGGCCGCCGCCGCGCGCGTGGACATCGAGGGCATGGGCGGCGTGGGCGTGCGCCTCAACCACCGCGACACCGCCGTCACCGACGCCCAAGGTCGGGCCTGGGTCTGGGGCCTGCAGCCCTGGCAAGAAAACACCCTGGGCGTGGCCGCCGACGTACTGCCGCTGGACGTGGTGCTGGGCGTGCCCGAGCTGCAAGTGCGCCCGCCCGCGCAGACCGTGGTGCGCGTGCGTTTTCCTGCCCGGCGCACGCGCTCGGCGCTGGTCAGCGTGCGCCTGCCCGACGGCAGCCCCGTGCCTCCGGGCGCGCGCGCCTACCGCATGCCCGCTGGCGCCCCGGCCAGCGACCAAGGCGCGCCCTTCGCCCACGGTGGCCAGGTCTGGCTCACCGATCTCGGGGACCTCAACACCTTGCGCGTCGAAGGCCCACAGGGCCTGTGCCGGGTGCGCTTTGCGCTCCCGCCGGACCAGGGCGCCGCCGCCACCCTGGGCCCATTGACCTGCACACCATGA
PROTEIN sequence
Length: 765
MRWRRVEALLLTLGLCGAITPARAEPAPRLLEVWLNGERVDGFAPLMEDDGRWYATADTLARWRLRPADPPRTIAGVAHHGLQDWSPRFDKAQQRLALQAPPEQFLAQRLRLDGRTDSEAPLMEPLPGLAMDYSVNAERSGGQSSTAALLDLRGFGWSTGGLARASGVLRAGANPAGLPRWQRLDTSLQHSDPSGLWRASLGDAITCGGELAPALRFAGAQYGTDFSLRPDLVTQPLPSVSGSAQVPSGVDLLIDNRPVGSAQVGPGNYTLDQLPGVTGAGEIRVVQRDLLGVERVQVVPYYSSPRLLRQDLREHCVEAGVLRRGYASASDTYGGGFVAGSLRHGLSDTLTLLGRAEVGQAVRAVHLGAHWVVAGAGVLSLQLGRSQADGAGAGQRTAIGFERVARAGSLSATIETAGTGFRSLDGARLPQRRATLFAGTSIGQTSVSGGLVWQRGAQGQDTRVLTAGLQRRLGAHWHAGLSLYRRDGQLSAAVLFTRALSPDTTLAARAQAGGDAGLTVQAQRSEPDAGGLGWRLQGGSDALSALAGVSWLGPLGRVEAQATKWRHDPEAHLRVAAQGGVLWIGGQPMLGRTIGEAAAARVDIEGMGGVGVRLNHRDTAVTDAQGRAWVWGLQPWQENTLGVAADVLPLDVVLGVPELQVRPPAQTVVRVRFPARRTRSALVSVRLPDGSPVPPGARAYRMPAGAPASDQGAPFAHGGQVWLTDLGDLNTLRVEGPQGLCRVRFALPPDQGAAATLGPLTCTP*