ggKbase home page

scnpilot_p_inoc_scaffold_2411_curated_8

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 8252..9118

Top 3 Functional Annotations

Value Algorithm Source
Squalene synthase hpnd {ECO:0000313|EMBL:EIK90314.1}; EC=2.5.1.32 {ECO:0000313|EMBL:EIK90314.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 288.0
  • Bit_score: 546
  • Evalue 1.90e-152
farnesyl-diphosphate farnesyltransferase (EC:2.5.1.21); K02291 phytoene synthase [EC:2.5.1.32] similarity KEGG
DB: KEGG
  • Identity: 76.7
  • Coverage: 288.0
  • Bit_score: 451
  • Evalue 1.40e-124
Squalene synthase hpnd n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MM74_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 94.1
  • Coverage: 288.0
  • Bit_score: 546
  • Evalue 1.40e-152

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 867
ATGAGCCCGCAAGACTACGTCCAGCAGAAGGCCGCCGCCTCCGGCAGCAGCTTCTACTACGCCTTCCTCTTCCTGCCGCCCGAGCGGCGTGCCGCCATCACCGCGTTCTACGCCTTCTGCCGCGAGGTGGACGACGTGGTCGACGAGGTGAGCGATCCGGGCGTGGCGCAGACCAAGCTGGCCTGGTGGCGCGGCGAGGTGGCGCAGGCCTTCGCGGGCCAGCCCAGCCACCCGGTGACGCAAGCCCTGATGCCGCTGACCGCCACCTACGGCATCGAGGCGCGCCACCTGCTGGGCGTCATCGACGGCTGCCAGATGGACCTGGAACAGAGCCGCTACCTCGACTTCGCCAACCTGCAGCGCTACTGCCACCTGGTGGCCGGCCTCGTGGGCGAGGTCGCCGCGCGCATCTTCGGCCAGACGCAGGCGCGCACCACCGAGTACGCGCACCGCATGGGCCTGGCCTTCCAGCTCACCAACATCGTGCGCGACGTGGGCGAGGACGCGGTGCGCGGGCGCATCTACCTGCCCATCGACGAGCTGCAGCGCTTCGACGTGAAGGCGCACGAGCTGCTGCGCCGCGGCGCAGCGCCGGGTGGCGAGACGGCCGACTTTCAGCGCCGCTTCACCGCGCTCATGGCCTTCCAATGCCAACGCGCACTGGCCACCTACGACGAGGCCCTGGCCCTGCTGCCCGACGCCGACCGCCGCAGCCAGAAACCCGGCCTGATGATGGCCAGCATCTACCGCACGCTGCTGCGCGAGATCGCGGCCGAGCCCTTGCTGGTGCTCACGCGCCGCGTGAGCCTGACGCCGCTGCGCAAGTTCTGGCTCGCCTGGAAGGTGCAGGCGCTGGGGCGGCTGTGA
PROTEIN sequence
Length: 289
MSPQDYVQQKAAASGSSFYYAFLFLPPERRAAITAFYAFCREVDDVVDEVSDPGVAQTKLAWWRGEVAQAFAGQPSHPVTQALMPLTATYGIEARHLLGVIDGCQMDLEQSRYLDFANLQRYCHLVAGLVGEVAARIFGQTQARTTEYAHRMGLAFQLTNIVRDVGEDAVRGRIYLPIDELQRFDVKAHELLRRGAAPGGETADFQRRFTALMAFQCQRALATYDEALALLPDADRRSQKPGLMMASIYRTLLREIAAEPLLVLTRRVSLTPLRKFWLAWKVQALGRL*