ggKbase home page

scnpilot_p_inoc_scaffold_583_curated_15

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 15136..15735

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimP n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MH66_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 199.0
  • Bit_score: 372
  • Evalue 3.20e-100
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.5
  • Coverage: 199.0
  • Bit_score: 372
  • Evalue 4.50e-100
hypothetical protein; K09748 ribosome maturation factor RimP similarity KEGG
DB: KEGG
  • Identity: 75.7
  • Coverage: 189.0
  • Bit_score: 295
  • Evalue 1.60e-77

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGGGCTGGCAAGACACCGTCGCGCAAACCGTCACCGCGCTGGGCTTCGACCTGGTGGACCTGGAACGGTCCGCCGGCGGCCTGCTGCGCGTCACGGTGGATTGGCCCTGGCAGCCCCCGGCCGACGGCCAGCCCCGCCCGCCCGAGCGCTTCGTCACGGTGGAGGACTGCGAGCGCATCACCCGCCAGATGCAGTACGCGCTGGAGGTCGAGGGCACGGACTACCGGCGCCTGGAAGTCGGCTCGCCGGGCATCGACCGCCCGCTGCGCCATGAGAACGACTTCCTGCGCTTCGAAGGTCACGTGATCGACATCACGCTCAAGGCGCCGCTGGGCGCCAATGGCGCCGTGTCGGCCAACCGCAAGAAATTCCGCGGCACGCTGGAGCGCGCCGCCGACGGGCGCTGGCAGATCGTCTGGAGCGACGAGCCGCCGGTGAAGCCGGGCCAGCGCGTGAGCAAGAAGCGCGAGCCCGCGCCGCTGCAGGCGCTGGGCTTCACGCTCGACGAAATCGCTCAGGCGCGGCTGGCGCCGATCGTGAACTTCAAGGGCCGGGGCACTGCCGGCGAGGCGGGCGCCGAGCCGGCCGACAGAACATAA
PROTEIN sequence
Length: 200
MGWQDTVAQTVTALGFDLVDLERSAGGLLRVTVDWPWQPPADGQPRPPERFVTVEDCERITRQMQYALEVEGTDYRRLEVGSPGIDRPLRHENDFLRFEGHVIDITLKAPLGANGAVSANRKKFRGTLERAADGRWQIVWSDEPPVKPGQRVSKKREPAPLQALGFTLDEIAQARLAPIVNFKGRGTAGEAGAEPADRT*