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scnpilot_p_inoc_scaffold_583_curated_16

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 15773..17272

Top 3 Functional Annotations

Value Algorithm Source
NusA antitermination factor n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MH65_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 97.4
  • Coverage: 499.0
  • Bit_score: 940
  • Evalue 9.60e-271
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 499.0
  • Bit_score: 940
  • Evalue 1.40e-270
nusa antitermination factor; K02600 N utilization substance protein A similarity KEGG
DB: KEGG
  • Identity: 86.4
  • Coverage: 494.0
  • Bit_score: 834
  • Evalue 1.40e-239

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1500
ATGAACCGCGAAATGTTGATGCTGATCGATGCCATCTCGCGCGAGAAGAACGTCGAGCGCGACGTGGTGCTCGGCGCGGTCGAGCAGGCGCTGGCTTCGGCCACCAAGAAGCTCTACAAGGGCGAGGTCGACATCCGCGTGGCGATGGACCCGGACACGGGCGCCTACGAAACCTTCCGCCGCTGGCTGGTGGTGCCCGATGAGGCCGGCCTGCAGAACCCCGACGCCGAGGAAATGCTGTCCGACGCGCGCGACGAGATCGCCGACATCGAAGAGGGCGACTACATCGAGAAGCCGGTGGAGAGCGTGCCCATCGGCCGCATCGGCGCCATGGCCGCCAAGCAGGTCATCCTGCAGAAGATCCGCGACGCCGAGCGCGAGATGCTGCTCAACGACTTCATGTCGCGCGGCGACAAGATCTTCGTCGGCACCGTCAAGCGCATGGACAAGGGCGACCTGATCGTCGAGAGCGGCCGCGTGGAAGGCCGCCTCAAGCGCGGCGAGATGATCCCCAAGGAGAACTTCCGCACCGGCGACCGCGTGCGCGCCATGATCATGGAAGTGGATCTCACGCTGCGCGGCGCGCCCATCCTGCTGTCGCGCTCGGCACCCGAGTTCATGATCGAGCTGTTCCGCCAGGAAGTGCCCGAGATCGAGCAGGGCCTGCTGGAGATCAAGAAGTGCGCCCGCGACGCCGGCTCGCGCGCCAAGATCGCCGTGCACAGCTTCGACAAGCGCATCGATCCCATCGGTACCTGCGTGGGCGTGCGCGGTTCGCGCGTCAACGCCGTCACCAACGAGCTCGCGGGCGAGCGCGTGGACATCGTGCTGTGGTCCGAGGACCCGGCACAGTTCGTGATCGGCGCGCTGGCGCCGGCCAACGTGGTCTCCATCGTGGTCGATGAAGAGCGCCACGCCATGGACGTGGTGGTGGACGAAGAGAACCTGGCCATCGCCATCGGCCGCGGCGGCCAGAACGTGCGCCTGGCCAGCGAGCTCACCGGCTGGCGCATCAACATCATGACGGCCGACGAATCGGCCCAGAAGCAGGCCGAGGAGGCCAGCTCGATCCGCACGCTGTTCATGTCCAAGCTGGACGTGGACCAGGAGATCGCCGACATCCTGATCGAGGAAGGTTTCACCAGCCTTGAGGAAGTGGCCTACGTGCCGCTGCAGGAGATGCTGGAGATCGAGTCCTTCGACGAAGACACGGTCAACGAGCTGCGCACCCGCGCCAAGGACGCGCTGCTGACCATGGAGATCGCCCGAGAGGAAAGCGTCGAGGAAGTCTCGCAGGACCTGCGCGACCTGAACGGCCTCACGCCCGAGCTGATCGCCAAGCTGGCCGAGGCCGGCATCCATACCCGCGACGACCTGGCCGATCTCGCGACGGACGAACTCACCGAGATCACGGGCCAGTCGGAAGCGCAAGCCACCGAGCTGATCATGCAGGCGCGCGCGCACTGGTTCACCGGTGACGAAACGCAGTCCCCGTCCTGA
PROTEIN sequence
Length: 500
MNREMLMLIDAISREKNVERDVVLGAVEQALASATKKLYKGEVDIRVAMDPDTGAYETFRRWLVVPDEAGLQNPDAEEMLSDARDEIADIEEGDYIEKPVESVPIGRIGAMAAKQVILQKIRDAEREMLLNDFMSRGDKIFVGTVKRMDKGDLIVESGRVEGRLKRGEMIPKENFRTGDRVRAMIMEVDLTLRGAPILLSRSAPEFMIELFRQEVPEIEQGLLEIKKCARDAGSRAKIAVHSFDKRIDPIGTCVGVRGSRVNAVTNELAGERVDIVLWSEDPAQFVIGALAPANVVSIVVDEERHAMDVVVDEENLAIAIGRGGQNVRLASELTGWRINIMTADESAQKQAEEASSIRTLFMSKLDVDQEIADILIEEGFTSLEEVAYVPLQEMLEIESFDEDTVNELRTRAKDALLTMEIAREESVEEVSQDLRDLNGLTPELIAKLAEAGIHTRDDLADLATDELTEITGQSEAQATELIMQARAHWFTGDETQSPS*