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scnpilot_p_inoc_scaffold_3293_curated_13

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(10088..10579)

Top 3 Functional Annotations

Value Algorithm Source
LysR type regulator of tsaMBCD n=1 Tax=Comamonas testosteroni RepID=P94678_COMTE similarity UNIREF
DB: UNIREF100
  • Identity: 64.7
  • Coverage: 153.0
  • Bit_score: 218
  • Evalue 6.30e-54
HTH-type transcriptional regulator TsaR; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.7
  • Coverage: 153.0
  • Bit_score: 218
  • Evalue 8.90e-54
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 33.6
  • Coverage: 152.0
  • Bit_score: 95
  • Evalue 2.00e-17

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Taxonomy

Comamonas testosteroni → Comamonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 492
TTCGCGATCACGCCCGCGCATCGGCAGGAGGTGCAGAGCGACATCGTGGCCGAGCCGCTCTACCAGAGCGACATCGTGATCGTTGCGCAGCGCGAGCACCCGCTCGCGCAGGCCACCAGCGTGGCCGAGCTGCGCGACTGCCAGTGGGTGCTGTCGAGCGCGCCGGGCGGGCCGGGGGCGGTCATCGATGAGGTGTTCGCGCGCGCCGGCCTGGGCGAGCCGCGGTTGGGCATGGTGTGCGAATCCTTCCTCGCCCTGCCGGGCGTGGTGACGCATTCGCGCATGCTCTCGACCATGCCGCGCACCCTGTTCGAGATGAACGCCTTTCGCGAGTCGCTGTGCATCGTGCCGGTGCGCGACGCCATGCCCAGCCCGACGATCTGCGTGCTGCGCCGCCACGACCTGCCCCTGACGCCGGCCGCGCGCGAGCTGATCGGCTGGATCCAGCACGTGGCGCTGGCCGGCCGGCGCGCGCTGGCCGATCAGCGCTGA
PROTEIN sequence
Length: 164
FAITPAHRQEVQSDIVAEPLYQSDIVIVAQREHPLAQATSVAELRDCQWVLSSAPGGPGAVIDEVFARAGLGEPRLGMVCESFLALPGVVTHSRMLSTMPRTLFEMNAFRESLCIVPVRDAMPSPTICVLRRHDLPLTPAARELIGWIQHVALAGRRALADQR*