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scnpilot_p_inoc_scaffold_854_curated_31

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(36371..37240)

Top 3 Functional Annotations

Value Algorithm Source
Uracil-DNA glycosylase {ECO:0000313|EMBL:EYR81951.1}; EC=3.2.2.- {ECO:0000313|EMBL:EYR81951.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.1
  • Coverage: 287.0
  • Bit_score: 126
  • Evalue 8.10e-26
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZ75_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 33.1
  • Coverage: 287.0
  • Bit_score: 126
  • Evalue 5.80e-26
uracil-DNA glycosylase similarity KEGG
DB: KEGG
  • Identity: 31.1
  • Coverage: 283.0
  • Bit_score: 123
  • Evalue 9.10e-26

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 870
ATGGCCGTTAGCTTCTCGCGCGAACTTACACCTGCGCTAGGCCGGCATGTTCAAGGGTGGAAAAACAGCCTCAACGAGGCTTGGCACCCCTTGGCCATGCAATGGGCCGAGGGACTTACACCAACTTCTATCAGCTCGACAAACGTGGAGCACATTTTCCCGCGGCTCGACGTGACCGACCATCGTCACGTTTTTAAAGCGTTCGACAACCTCTCGCCTGCCGCAGTCCGTGTTGTTCTTCTTGGACAGGACCCCTACCCGAACGAAGCGCAGGCCACTGGGCGGGCGTTTGAGCAAGGAGACCTGGAATCGTTCCGTGCCCAAAAGCCTCGGGTGGCGCACAGCCTCAACATGATGCTGCGAATGATGGTTAAAGCAACTGTCATCCAGGCTGATGAAAGGCCAAGAACGAAACGTGAGGACCTTCGGACGTTGCTTGCTCAAGCGCCCCTAAAAGTCGTTTCACCCACTCAGGTGTTCGACCGTCTGGTTGCACAAGGAGTCATGTTCTTGAACGCTAGCTTGACGATTTCGAAATCCGCCTCGCGAAGAAACAATGACCATCTGCGTGGCCATCTGGCGTTCTGGAGGCCGTTCGTCCAAGCGGTTCTCCGCGACCTGCTCGTGCGGAATGGCTCCGCGCCGGTGTTCCTTCTGATGGGGAAGCCGGCTCAGAGGTTGTTTGACGATATGACCGCGAGCACTTGCGCCTCGACACGCACGCGCGTCGTGCGCTCAAAGCATCCTTCGGCAAACTCATTTTGCAGAGAAGCGAACCCATTCACCTTAGTCAACGACGAGCTTTCTGCGGCAGGCGCTCAAACGGTCAAATGGCTGCCGACCTCGCTTGACGGTGCGAGCTCCAAGTAG
PROTEIN sequence
Length: 290
MAVSFSRELTPALGRHVQGWKNSLNEAWHPLAMQWAEGLTPTSISSTNVEHIFPRLDVTDHRHVFKAFDNLSPAAVRVVLLGQDPYPNEAQATGRAFEQGDLESFRAQKPRVAHSLNMMLRMMVKATVIQADERPRTKREDLRTLLAQAPLKVVSPTQVFDRLVAQGVMFLNASLTISKSASRRNNDHLRGHLAFWRPFVQAVLRDLLVRNGSAPVFLLMGKPAQRLFDDMTASTCASTRTRVVRSKHPSANSFCREANPFTLVNDELSAAGAQTVKWLPTSLDGASSK*