ggKbase home page

scnpilot_p_inoc_scaffold_907_curated

Search features with annotation key words

Displaying items 1-30 of 37 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_907_curated_1
Hyphomonas atlantica, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

220..1203
DNA (984bp) protein (328aa)
Efflux pump membrane fusion protein n=1 Tax=Marinobacter santoriniensis NKSG1 RepID=M7D9F5_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:KCZ60540.1}; TaxID=1280948 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas atlantica.;"
secretion protein HlyD; K01993 HlyD family secretion protein
scnpilot_p_inoc_scaffold_907_curated_2
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1203..2849
DNA (1647bp) protein (549aa)
ABC transporter multidrug efflux pump, fused ATP-binding domains n=1 Tax=Cronobacter condimenti 1330 RepID=K8A4H7_9ENTR
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:EWY38871.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
hypothetical protein; K01990 ABC-2 type transport system ATP-binding protein
scnpilot_p_inoc_scaffold_907_curated_3
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2846..3964
DNA (1119bp) protein (373aa)
ABC-2 type transporter n=1 Tax=Thiocapsa marina 5811 RepID=F9UFD7_9GAMM
Membrane protein {ECO:0000313|EMBL:EWY38870.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
Fis family transcriptional regulator; K09686 antibiotic transport system permease protein
scnpilot_p_inoc_scaffold_907_curated_4
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3970..5067
DNA (1098bp) protein (366aa)
ABC-type multidrug transport system, permease component n=1 Tax=Desulfovibrio africanus PCS RepID=M5Q1A2_DESAF
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
ABC-2 type transporter; K09686 antibiotic transport system permease protein
scnpilot_p_inoc_scaffold_907_curated_5
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5021..5437)
DNA (417bp) protein (139aa)
Nitrogenase molybdenum-iron protein n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TW38_9PROT
Nitrogenase molybdenum-iron protein {ECO:0000313|EMBL:CAM74845.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
NifX protein
scnpilot_p_inoc_scaffold_907_curated_6
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5437..6534)
DNA (1098bp) protein (366aa)
Molybdenum import ATP-binding protein ModC {ECO:0000256|HAMAP-Rule:MF_01705}; EC=3.6.3.29 {ECO:0000256|HAMAP-Rule:MF_01705, ECO:0000313|EMBL:CDK98741.1};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
ABC-type molybdate transport system, ATPase component; K02017 molybdate transport system ATP-binding protein [EC:3.6.3.29]
Molybdenum ABC transporter (ATP-binding protein) n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F375_9PROT
scnpilot_p_inoc_scaffold_907_curated_7
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6539..7231)
DNA (693bp) protein (231aa)
Molybdenum transport system permease n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TW40_9PROT
Molybdenum transport system permease {ECO:0000313|EMBL:CAM74847.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
ABC-type molybdate transport system, permease component; K02018 molybdate transport system permease protein
scnpilot_p_inoc_scaffold_907_curated_8
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7355..7822
DNA (468bp) protein (156aa)
Putative RutC family protein y4sK n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F2N2_9PROT
Putative RutC family protein y4sK {ECO:0000313|EMBL:CDK98743.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
putative translation initiation inhibitor
scnpilot_p_inoc_scaffold_907_curated_9
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7779..8687)
DNA (909bp) protein (303aa)
Putative cysteine and O-acetylserine efflux permease n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EZV5_9PROT
Putative cysteine and O-acetylserine efflux permease {ECO:0000313|EMBL:CDK98744.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
hypothetical protein
scnpilot_p_inoc_scaffold_907_curated_10
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8796..9659
DNA (864bp) protein (288aa)
Putative DNA-binding transcriptional repressor of flagellar, motility and chemotaxis genes n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EZR9_9PROT
Putative DNA-binding transcriptional repressor of flagellar, motility and chemotaxis genes {ECO:0000313|EMBL:CDK98745.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
putative transcriptional regulatory protein,LysR family
scnpilot_p_inoc_scaffold_907_curated_11
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9763..10950)
DNA (1188bp) protein (396aa)
GGDEF n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TW43_9PROT
GGDEF {ECO:0000313|EMBL:CAM74850.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
GGDEF domain-containing protein
scnpilot_p_inoc_scaffold_907_curated_12
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11230..12558
DNA (1329bp) protein (443aa)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
coenzyme F390 synthetase; K01912 phenylacetate-CoA ligase [EC:6.2.1.30]
Phenylacetate-coenzyme A ligase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TW44_9PROT
scnpilot_p_inoc_scaffold_907_curated_13
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12616..12966)
DNA (351bp) protein (117aa)
Phasin n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U480_9PROT
Phasin {ECO:0000313|EMBL:CAM77687.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
hypothetical protein
scnpilot_p_inoc_scaffold_907_curated_14
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13167..14291
DNA (1125bp) protein (375aa)
Putative multidrug efflux system, subunit A n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F2J4_9PROT
Putative multidrug efflux system, subunit A {ECO:0000313|EMBL:CDK98506.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
mdtA; multidrug efflux transporter; K07799 putative multidrug efflux transporter MdtA
scnpilot_p_inoc_scaffold_907_curated_15
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14291..17377
DNA (3087bp) protein (1029aa)
Multidrug efflux system, subunit C n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EZC3_9PROT
Multidrug efflux system, subunit C {ECO:0000313|EMBL:CDK98507.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
mdtB; multidrug efflux system, subunit B (AcrB family)
scnpilot_p_inoc_scaffold_907_curated_16
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17452..17631
DNA (180bp) protein (60aa)
Uncharacterized protein n=2 Tax=Magnetospirillum gryphiswaldense RepID=V6F1Y6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDK98508.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
scnpilot_p_inoc_scaffold_907_curated_17
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17635..18273)
DNA (639bp) protein (213aa)
Maleylacetoacetate isomerase {ECO:0000313|EMBL:CAM77681.1}; EC=5.2.1.2 {ECO:0000313|EMBL:CAM77681.1};; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
Maleylacetoacetate isomerase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F2J9_9PROT
nagL; maleylpyruvate isomerase
scnpilot_p_inoc_scaffold_907_curated_18
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18270..19280)
DNA (1011bp) protein (337aa)
Fumarylacetoacetate (FAA) hydrolase family protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U473_9PROT
Fumarylacetoacetate (FAA) hydrolase family protein {ECO:0000313|EMBL:CAM77680.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
potential fumarylacetoacetate hydrolase
scnpilot_p_inoc_scaffold_907_curated_19
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19390..19614)
DNA (225bp) protein (75aa)
Uncharacterized protein n=2 Tax=Magnetospirillum gryphiswaldense RepID=V6F1Z3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDK98513.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
small subunit of monooxygenase
scnpilot_p_inoc_scaffold_907_curated_20
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19628..21280)
DNA (1653bp) protein (551aa)
mhpA; FAD-dependent oxidoreductase (EC:1.14.13.-); K05712 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127]
Flavoprotein monooxygenase:Monooxygenase, FAD-binding n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U471_9PROT
Flavoprotein monooxygenase:Monooxygenase, FAD-binding {ECO:0000313|EMBL:CAM77678.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
scnpilot_p_inoc_scaffold_907_curated_21
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21335..22300)
DNA (966bp) protein (322aa)
Beta-lactamase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U470_9PROT
Beta-lactamase {ECO:0000313|EMBL:CAM77677.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
beta-lactamase domain-containing protein
scnpilot_p_inoc_scaffold_907_curated_22
Pseudomonas viridiflava, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22411..23151)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Pseudomonas viridiflava UASWS0038 RepID=K6A9A1_PSEVI
Strain LMCA8 contig_29, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ33076.1}; TaxID=33069 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas viridiflava.;"
hypothetical protein; K07090
scnpilot_p_inoc_scaffold_907_curated_23
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23208..24098
DNA (891bp) protein (297aa)
Putative transcriptional regulatory protein,LysR family n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AQ77_AZOBR
LysR family transcriptional regulator {ECO:0000313|EMBL:AIB13686.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
putative transcriptional regulatory protein,LysR family
scnpilot_p_inoc_scaffold_907_curated_24
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24140..24688
DNA (549bp) protein (183aa)
Microcystin dependent protein n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U469_9PROT
Microcystin dependent protein {ECO:0000313|EMBL:CAM77676.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
tail collar domain-containing protein
scnpilot_p_inoc_scaffold_907_curated_25
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24716..25126)
DNA (411bp) protein (137aa)
Rrf2-like transcriptional regulator protein n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U468_9PROT
Rrf2-like transcriptional regulator protein {ECO:0000313|EMBL:CAM77675.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
transcriptional regulator
scnpilot_p_inoc_scaffold_907_curated_26
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25123..25620)
DNA (498bp) protein (166aa)
Acetyltransferases n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U467_9PROT
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CDK98518.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
hypothetical protein
scnpilot_p_inoc_scaffold_907_curated_27
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25707..26657)
DNA (951bp) protein (317aa)
Radical SAM domain protein n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U466_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDK98519.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
hypothetical protein
scnpilot_p_inoc_scaffold_907_curated_28
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26911..28041
DNA (1131bp) protein (377aa)
4Fe-4S ferredoxin, iron-sulfur binding protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EZ30_9PROT
4Fe-4S ferredoxin, iron-sulfur binding protein {ECO:0000313|EMBL:CDK98520.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
4Fe-4S ferredoxin
scnpilot_p_inoc_scaffold_907_curated_29
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28044..28622
DNA (579bp) protein (193aa)
Cyclic nucleotide-binding n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U464_9PROT
Cyclic nucleotide-binding {ECO:0000313|EMBL:CAM77671.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
putative Crp/Fnr family transcriptional regulator
scnpilot_p_inoc_scaffold_907_curated_30
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28622..29506
DNA (885bp) protein (295aa)
Putative dihydroorotate dehydrogenase(Electron transfer subunit) n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EZD9_9PROT
Putative dihydroorotate dehydrogenase(Electron transfer subunit) {ECO:0000313|EMBL:CDK98522.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
putative NiFe hydrogenase gamma subunit
Displaying items 1-30 of 37 in total

View Taxonomy