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scnpilot_p_inoc_scaffold_294_curated

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Displaying items 1-30 of 80 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_294_curated_1
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(112..1248)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FQP9_PHAMO
Uncharacterized protein {ECO:0000313|EMBL:CCG40687.1}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
scnpilot_p_inoc_scaffold_294_curated_2
unknown

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comp(1264..1434)
DNA (171bp) protein (57aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_294_curated_3
unknown

Not on your lists

2384..2491
DNA (108bp) protein (36aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_294_curated_4
unknown

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2502..2603
DNA (102bp) protein (34aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_294_curated_5
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2613..4322
DNA (1710bp) protein (570aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospiri
kdpA; K+-transporting ATPase ATPase A chain (EC:3.6.3.12); K01546 K+-transporting ATPase ATPase A chain [EC:3.6.3.12]
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00036A4512
scnpilot_p_inoc_scaffold_294_curated_6
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4333..6399
DNA (2067bp) protein (689aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospiri
high-affinity K+ transport system; K01547 K+-transporting ATPase ATPase B chain [EC:3.6.3.12]
Potassium-transporting ATPase B chain n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3AAC3_9PROT
scnpilot_p_inoc_scaffold_294_curated_7
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6414..7004
DNA (591bp) protein (197aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospiri
K+-transporting ATPase; K01548 K+-transporting ATPase ATPase C chain [EC:3.6.3.12]
Potassium-transporting ATPase C chain n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Z547_9PROT
scnpilot_p_inoc_scaffold_294_curated_8
unknown

Not on your lists

7006..7332
DNA (327bp) protein (109aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_294_curated_9
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7343..10024
DNA (2682bp) protein (894aa)
osmosensitive K+ channel histidine kinase; K07646 two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
Two-component sensor n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U5M7_9PROT
Histidine kinase {ECO:0000313|EMBL:KJS40340.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
scnpilot_p_inoc_scaffold_294_curated_10
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10021..10773
DNA (753bp) protein (251aa)
Response regulator n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2ZQ59_9PROT
Response regulator {ECO:0000313|EMBL:EME69452.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
response regulator; K07667 two-component system, OmpR family, KDP operon response regulator KdpE
scnpilot_p_inoc_scaffold_294_curated_11
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10774..11985)
DNA (1212bp) protein (404aa)
Permease of the major facilitator superfamily n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W971_MAGSA
Putative transporter {ECO:0000313|EMBL:KIL99207.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
major facilitator superfamily permease
scnpilot_p_inoc_scaffold_294_curated_12
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11989..12792)
DNA (804bp) protein (268aa)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; K02510 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [EC:4.1.2.-]
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W970_MAGSA
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase {ECO:0000313|EMBL:BAE49605.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
scnpilot_p_inoc_scaffold_294_curated_13
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12805..13611)
DNA (807bp) protein (269aa)
2-keto-4-pentenoate hydratase; K02509 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-]
2-keto-4-pentenoate hydratase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W969_MAGSA
2-keto-4-pentenoate hydratase {ECO:0000313|EMBL:BAE49606.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
scnpilot_p_inoc_scaffold_294_curated_14
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13615..14004)
DNA (390bp) protein (130aa)
5-carboxymethyl-2-hydroxymuconate isomerase; K01826 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
5-carboxymethyl-2-hydroxymuconate isomerase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W968_MAGSA
5-carboxymethyl-2-hydroxymuconate isomerase {ECO:0000313|EMBL:BAE49607.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
scnpilot_p_inoc_scaffold_294_curated_15
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14077..14940)
DNA (864bp) protein (288aa)
hypothetical protein; K00455 3,4-dihydroxyphenylacetate 2,3-dioxygenase [EC:1.13.11.15]
Uncharacterized conserved protein n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W967_MAGSA
Uncharacterized conserved protein {ECO:0000313|EMBL:BAE49608.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
scnpilot_p_inoc_scaffold_294_curated_16
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15036..16493)
DNA (1458bp) protein (486aa)
NAD-dependent aldehyde dehydrogenase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W966_MAGSA
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase {ECO:0000313|EMBL:KIL99212.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
NAD-dependent aldehyde dehydrogenase
scnpilot_p_inoc_scaffold_294_curated_17
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16501..17262)
DNA (762bp) protein (254aa)
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase; K05921 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-]
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W965_MAGSA
5-carboxymethyl-2-hydroxymuconate delta-isomerase {ECO:0000313|EMBL:KIL99213.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
scnpilot_p_inoc_scaffold_294_curated_18
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17259..18032)
DNA (774bp) protein (258aa)
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase; K05921 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-]
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W964_MAGSA
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase {ECO:0000313|EMBL:BAE49611.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
scnpilot_p_inoc_scaffold_294_curated_19
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18051..19379)
DNA (1329bp) protein (443aa)
TRAP-type C4-dicarboxylate transport system n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W963_MAGSA
TRAP-type C4-dicarboxylate transport system
TRAP-type C4-dicarboxylate transport system {ECO:0000313|EMBL:BAE49612.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
scnpilot_p_inoc_scaffold_294_curated_20
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19376..19909)
DNA (534bp) protein (178aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W962_MAGSA
Uncharacterized protein {ECO:0000313|EMBL:KIL99216.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_294_curated_21
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19946..20995)
DNA (1050bp) protein (350aa)
TRAP-type C4-dicarboxylate transport system n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W961_MAGSA
Uncharacterized protein {ECO:0000313|EMBL:KIL99217.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
TRAP-type C4-dicarboxylate transport system
scnpilot_p_inoc_scaffold_294_curated_22
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21186..21656
DNA (471bp) protein (157aa)
Transcriptional regulator n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W960_MAGSA
Homoprotocatechuate degradative operon repressor {ECO:0000313|EMBL:KIL99218.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
transcriptional regulator
scnpilot_p_inoc_scaffold_294_curated_23
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21688..22092)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W958_MAGSA
Protein GlcG {ECO:0000313|EMBL:KIL99220.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_294_curated_24
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22092..23549)
DNA (1458bp) protein (486aa)
NAD-dependent aldehyde dehydrogenase; K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
NAD-dependent aldehyde dehydrogenase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W957_MAGSA
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:BAE49618.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
scnpilot_p_inoc_scaffold_294_curated_25
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23676..24194
DNA (519bp) protein (173aa)
Transcriptional regulator n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W956_MAGSA
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:BAE49619.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
scnpilot_p_inoc_scaffold_294_curated_26
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24257..24781
DNA (525bp) protein (175aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TWB2_9PROT
Putative uncharacterized protein {ECO:0000313|EMBL:CAM74919.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
Flp pilus assembly protein TadG
scnpilot_p_inoc_scaffold_294_curated_27
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24778..25332
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F047_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDK98829.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
Flp pilus assembly protein TadG
scnpilot_p_inoc_scaffold_294_curated_28
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25329..26711
DNA (1383bp) protein (461aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TWB0_9PROT
Putative uncharacterized protein {ECO:0000313|EMBL:CAM74917.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
Flp pilus assembly protein TadG
scnpilot_p_inoc_scaffold_294_curated_29
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27029..27208
DNA (180bp) protein (60aa)
Flp/Fap pilin component n=2 Tax=Magnetospirillum gryphiswaldense RepID=V6F0C1_9PROT
Flp/Fap pilin component {ECO:0000313|EMBL:CDK98827.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
Flp/Fap pilin protein; K02651 pilus assembly protein Flp/PilA
scnpilot_p_inoc_scaffold_294_curated_30
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27300..27767
DNA (468bp) protein (156aa)
Flp pilus assembly protein, protease CpaA; K02278 prepilin peptidase CpaA [EC:3.4.23.43]
Prepilin peptidase protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F3I3_9PROT
Prepilin peptidase protein {ECO:0000313|EMBL:CDK98826.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
Displaying items 1-30 of 80 in total

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