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scnpilot_p_inoc_scaffold_179_curated

Search features with annotation key words

Displaying items 61-90 of 181 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_179_curated_61
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57926..61087)
DNA (3162bp) protein (1054aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FQ00_PHAMO
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:CCG40438.1}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
Putative silver efflux pump
scnpilot_p_inoc_scaffold_179_curated_62
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61101..62249)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FPZ9_PHAMO
Uncharacterized protein {ECO:0000313|EMBL:CCG40437.1}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
Membrane-fusion protein
scnpilot_p_inoc_scaffold_179_curated_63
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62242..63507)
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FPZ8_PHAMO
Uncharacterized protein {ECO:0000313|EMBL:CCG40436.1}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
outer membrane protein
scnpilot_p_inoc_scaffold_179_curated_64
unknown

Not on your lists

comp(63626..63913)
DNA (288bp) protein (96aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_179_curated_65
unknown

Not on your lists

comp(63985..64395)
DNA (411bp) protein (137aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_179_curated_66
Phaeospirillum fulvum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64512..66029)
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9TVU3_PHAFV
Uncharacterized protein {ECO:0000313|EMBL:EPY02540.1}; TaxID=1316936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum fulvum MGU-K5.;"
hypothetical protein
scnpilot_p_inoc_scaffold_179_curated_67
unknown

Not on your lists

comp(66377..66736)
DNA (360bp) protein (120aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_179_curated_68
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67111..67827
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI0003627876
resolvase domain-containing protein
Resolvase domain protein {ECO:0000313|EMBL:ACL62234.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
scnpilot_p_inoc_scaffold_179_curated_69
unknown

Not on your lists

comp(67867..68034)
DNA (168bp) protein (56aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_179_curated_70
unknown

Not on your lists

comp(68037..68921)
DNA (885bp) protein (295aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_179_curated_71
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68990..70909)
DNA (1920bp) protein (640aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W102_MAGSA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAE52473.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
scnpilot_p_inoc_scaffold_179_curated_72
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70937..72295)
DNA (1359bp) protein (453aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W101_MAGSA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAE52474.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
scnpilot_p_inoc_scaffold_179_curated_73
unknown

Not on your lists

72616..73455
DNA (840bp) protein (280aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_179_curated_74
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73532..73858)
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U2T1_9PROT
Putative uncharacterized protein {ECO:0000313|EMBL:CAM77188.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
hypothetical protein
scnpilot_p_inoc_scaffold_179_curated_75
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74317..74541)
DNA (225bp) protein (75aa)
UPI0003D00105 related cluster n=1 Tax=unknown RepID=UPI0003D00105
Uncharacterized protein {ECO:0000313|EMBL:ESZ15251.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
scnpilot_p_inoc_scaffold_179_curated_76
Streptomyces sp. WM6386, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

75045..78632
DNA (3588bp) protein (1196aa)
Putative signal transduction protein with Nacht domain n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XR49_PSEMY
Uncharacterized protein {ECO:0000313|EMBL:KKD06858.1}; TaxID=1415558 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. WM6386.;"
signal transduction protein
scnpilot_p_inoc_scaffold_179_curated_77
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78687..78896
DNA (210bp) protein (70aa)
Auxin Efflux Carrier n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SPC2_RHOPH
Transporter {ECO:0000313|EMBL:EWY41883.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
auxin efflux carrier family protein; K07088
scnpilot_p_inoc_scaffold_179_curated_78
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79105..79878)
DNA (774bp) protein (258aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Burkholderia glumae (strain BGR1) RepID=C5AD17_BURGB
enoyl-CoA hydratase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ACR30132.1}; TaxID=626418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glumae (strain BGR1).;"
scnpilot_p_inoc_scaffold_179_curated_79
Phaeospirillum fulvum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80018..80839)
DNA (822bp) protein (274aa)
short-chain dehydrogenase (EC:1.1.1.100); K13775 citronellol/citronellal dehydrogenase
Short chain dehydrogenase n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9THA7_PHAFV
Short chain dehydrogenase {ECO:0000313|EMBL:EPY01651.1}; TaxID=1316936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum fulvum MGU-K5.;"
scnpilot_p_inoc_scaffold_179_curated_80
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80852..81373)
DNA (522bp) protein (174aa)
Thioesterase superfamily n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FSX6_PHAMO
Thioesterase superfamily {ECO:0000313|EMBL:CCG41464.1}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
thioesterase superfamily protein
scnpilot_p_inoc_scaffold_179_curated_81
Pararhodospirillum photometricum, Pararhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(81390..83174)
DNA (1785bp) protein (595aa)
Acyl-CoA dehydrogenase (EC:1.3.8.1)
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:CCG09436.1}; EC=1.3.8.1 {ECO:0000313|EMBL:CCG09436.1};; TaxID=1150469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Pararhodospirillum.;" source="Rhodospirillum photometricum DSM 122.;"
Acyl-CoA dehydrogenase n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SPB1_RHOPH
scnpilot_p_inoc_scaffold_179_curated_82
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83283..85604)
DNA (2322bp) protein (774aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35)
3-hydroxyacyl-CoA dehydrogenase NAD-binding n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FSX4_PHAMO
3-hydroxyacyl-CoA dehydrogenase NAD-binding {ECO:0000313|EMBL:CCG41462.1}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
scnpilot_p_inoc_scaffold_179_curated_83
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85606..86742)
DNA (1137bp) protein (379aa)
acetyl-CoA acetyltransferase (EC:2.3.1.16); K00632 acetyl-CoA acyltransferase [EC:2.3.1.16]
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ACB95386.1}; EC=2.3.1.16 {ECO:0000313|EMBL:ACB95386.1};; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
Acetyl-CoA acetyltransferase n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2ICW2_BEII9
scnpilot_p_inoc_scaffold_179_curated_84
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86816..87205)
DNA (390bp) protein (130aa)
Transcriptional regulator, MerR family n=2 Tax=Phaeospirillum RepID=H8FSX2_PHAMO
Transcriptional regulator, MerR family {ECO:0000313|EMBL:CCG41460.1}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
MerR family transcriptional regulator
scnpilot_p_inoc_scaffold_179_curated_85
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(87328..89019)
DNA (1692bp) protein (564aa)
Putative long-chain-fatty-acid--CoA ligase putative long-chain acyl-CoA synthetase pimeloyl-CoA ligase pimA {ECO:0000313|EMBL:CCG41459.1}; EC=6.2.1.3 {ECO:0000313|EMBL:CCG41459.1};; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
AMP-dependent synthetase and ligase (EC:6.2.1.3)
Putative long-chain-fatty-acid--CoA ligase putative long-chain acyl-CoA synthetase pimeloyl-CoA ligase pimA n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FSX1_PHAMO
scnpilot_p_inoc_scaffold_179_curated_86
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89021..90304)
DNA (1284bp) protein (428aa)
Aromatic hydrocarbon degradation protein n=2 Tax=Rhodospirillum rubrum RepID=G2TGR9_RHORU
aromatic hydrocarbon degradation protein; K06076 long-chain fatty acid transport protein
Membrane protein involved in aromatic hydrocarbon degradation {ECO:0000313|EMBL:ABC22114.1}; Flags: Precursor;; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;"
scnpilot_p_inoc_scaffold_179_curated_87
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90441..91070)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z7H1_AZOL4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBS86893.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
scnpilot_p_inoc_scaffold_179_curated_88
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91084..91383)
DNA (300bp) protein (100aa)
Sterol-binding n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FSW9_PHAMO
Sterol-binding {ECO:0000313|EMBL:CCG41457.1}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
Sterol-binding
scnpilot_p_inoc_scaffold_179_curated_89
Candidatus Nitrosopelagicus brevis, Candidatus Nitrosopelagicus, Thaumarchaeota, Archaea

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91641..92834
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI00037277BD
Uncharacterized protein {ECO:0000313|EMBL:AJA92861.1}; TaxID=1410606 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Candidatus Nitrosopelagicus brevis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_179_curated_90
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(92803..94056)
DNA (1254bp) protein (418aa)
Putative Decarboxylase beta subunit {ECO:0000313|EMBL:CDK97334.1}; EC=4.1.1.70 {ECO:0000313|EMBL:CDK97334.1};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
sodium ion-translocating decarboxylase subunit beta; K01572 oxaloacetate decarboxylase, beta subunit [EC:4.1.1.3]
Putative Decarboxylase beta subunit n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EVY2_9PROT
Displaying items 61-90 of 181 in total

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