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scnpilot_p_inoc_scaffold_179_curated

Search features with annotation key words

Displaying items 91-120 of 181 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_179_curated_91
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(94067..94480)
DNA (414bp) protein (138aa)
Putative biotin carboxyl carrier protein subunit n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EYN7_9PROT
Putative biotin carboxyl carrier protein subunit {ECO:0000313|EMBL:CDK97333.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
biotin/lipoyl attachment
scnpilot_p_inoc_scaffold_179_curated_92
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(94491..94820)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EW81_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDK97332.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
scnpilot_p_inoc_scaffold_179_curated_93
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(94832..96385)
DNA (1554bp) protein (518aa)
Putative Methylmalonyl-CoA carboxyltransferase 12S subunit {ECO:0000313|EMBL:CDK97331.1}; EC=2.1.3.1 {ECO:0000313|EMBL:CDK97331.1};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
carboxyl transferase (EC:6.4.1.3)
Putative Methylmalonyl-CoA carboxyltransferase 12S subunit n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EZ77_9PROT
scnpilot_p_inoc_scaffold_179_curated_94
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(96453..97604)
DNA (1152bp) protein (384aa)
Lactate dehydrogenase {ECO:0000313|EMBL:KGM35214.1}; EC=1.1.2.3 {ECO:0000313|EMBL:KGM35214.1};; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
L-lactate dehydrogenase; K00101 L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
L-lactate dehydrogenase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I5E1_AZOC5
scnpilot_p_inoc_scaffold_179_curated_95
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97642..97995)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EYM8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDK97323.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
scnpilot_p_inoc_scaffold_179_curated_96
unknown

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98113..98277
DNA (165bp) protein (55aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_179_curated_97
Pelobacter carbinolicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(98241..99626)
DNA (1386bp) protein (462aa)
Efflux pump, RND family, outer membrane lipoprotein n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q39ZX9_PELCD
outer membrane protein
Efflux pump, RND family, outer membrane lipoprotein {ECO:0000313|EMBL:ABA90328.1}; TaxID=338963 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1).;"
scnpilot_p_inoc_scaffold_179_curated_98
RifOxyB12_full_Planctomycetes_42_10_curated, Planctomycetes, Bacteria

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comp(99623..100555)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IQ64_9PLAN
hypothetical protein
Tax=RifOxyB12_full_Planctomycetes_42_10_curated
scnpilot_p_inoc_scaffold_179_curated_99
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(100559..101257)
DNA (699bp) protein (233aa)
ABC-type antimicrobial peptide transport system, ATPase component n=1 Tax=Methylomicrobium album BG8 RepID=H8GNQ3_METAL
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:EIC30809.1}; TaxID=686340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium album BG8.;"
ABC transporter
scnpilot_p_inoc_scaffold_179_curated_100
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(101254..102411)
DNA (1158bp) protein (386aa)
ABC-type antimicrobial peptide transport system, permease component n=1 Tax=Methylomicrobium album BG8 RepID=H8GNQ2_METAL
ABC-type antimicrobial peptide transport system, permease component {ECO:0000313|EMBL:EIC30808.1}; TaxID=686340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium album BG8.;"
ABC-transporter permease; K02004 putative ABC transport system permease protein rbh
scnpilot_p_inoc_scaffold_179_curated_101
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

102559..103119
DNA (561bp) protein (187aa)
RNA polymerase sigma factor n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U4L1_9PROT
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:CDK97322.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_p_inoc_scaffold_179_curated_102
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

103116..103445
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U4L0_9PROT
Putative uncharacterized protein {ECO:0000313|EMBL:CAM77817.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
scnpilot_p_inoc_scaffold_179_curated_103
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

103448..103888
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U4K9_9PROT
Putative uncharacterized protein {ECO:0000313|EMBL:CAM77816.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
scnpilot_p_inoc_scaffold_179_curated_104
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

104012..104623
DNA (612bp) protein (204aa)
Putative RNA polymerase ECF-type sigma factor n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EVX1_9PROT
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:CDK97319.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_p_inoc_scaffold_179_curated_105
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

104722..105939
DNA (1218bp) protein (406aa)
Predicted flagellin protein n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U4K7_9PROT
Predicted flagellin protein {ECO:0000313|EMBL:CAM77814.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
flagellin
scnpilot_p_inoc_scaffold_179_curated_106
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

106029..107717
DNA (1689bp) protein (563aa)
Flagellar hook-associated protein 2 (FliD, filament cap protein) n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U4K6_9PROT
Flagellar hook-associated protein 2 (FliD, filament cap protein) {ECO:0000313|EMBL:CAM77813.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
flagellar hook-associated 2 domain-containing protein; K02407 flagellar hook-associated protein 2
scnpilot_p_inoc_scaffold_179_curated_107
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

107721..108143
DNA (423bp) protein (141aa)
Predicted Flagellin-specific chaperone FliS (COG1516) n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U4K5_9PROT
Predicted Flagellin-specific chaperone FliS (COG1516) {ECO:0000313|EMBL:CAM77812.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
hypothetical protein; K02422 flagellar protein FliS
scnpilot_p_inoc_scaffold_179_curated_108
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

108248..108484
DNA (237bp) protein (79aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U4K4_9PROT
Putative uncharacterized protein {ECO:0000313|EMBL:CAM77811.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
hypothetical protein
scnpilot_p_inoc_scaffold_179_curated_109
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

108781..109446
DNA (666bp) protein (222aa)
Basal-body rod modification protein flgD n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U4K0_9PROT
Basal-body rod modification protein flgD {ECO:0000313|EMBL:CAM77807.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
flagellar hook capping protein; K02389 flagellar basal-body rod modification protein FlgD
scnpilot_p_inoc_scaffold_179_curated_110
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

109462..110751
DNA (1290bp) protein (430aa)
Flagellar hook protein FlgE n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U4J9_9PROT
Flagellar hook protein FlgE {ECO:0000313|EMBL:CAM77806.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
flgE; FlgE protein; K02390 flagellar hook protein FlgE
scnpilot_p_inoc_scaffold_179_curated_111
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

110771..111118
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EVW2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDK97309.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
scnpilot_p_inoc_scaffold_179_curated_112
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

111186..111650
DNA (465bp) protein (155aa)
Uncharacterized protein n=2 Tax=Magnetospirillum gryphiswaldense RepID=V6EYM0_9PROT
Putative uncharacterized protein {ECO:0000313|EMBL:CAM77805.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
hypothetical protein
scnpilot_p_inoc_scaffold_179_curated_113
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

111675..113336
DNA (1662bp) protein (554aa)
Putative flagellar hook-associated protein flgK n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EW57_9PROT
Putative flagellar hook-associated protein flgK {ECO:0000313|EMBL:CDK97307.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
flagellar hook-associated protein FlgK; K02396 flagellar hook-associated protein 1 FlgK
scnpilot_p_inoc_scaffold_179_curated_114
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

113339..114238
DNA (900bp) protein (300aa)
Flagellin and hook associated protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U4J6_9PROT
Flagellin and hook associated protein {ECO:0000313|EMBL:CAM77803.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
flgL; flagellin and hook associated protein; K02397 flagellar hook-associated protein 3 FlgL
scnpilot_p_inoc_scaffold_179_curated_115
unknown

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114363..114539
DNA (177bp) protein (59aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_179_curated_116
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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114636..116606
DNA (1971bp) protein (657aa)
TonB-dependent hemoglobin n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IY25_RHOCS
TonB-dependent hemoglobin; K02014 iron complex outermembrane recepter protein
TonB-dependent hemoglobin {ECO:0000313|EMBL:ACJ01199.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
scnpilot_p_inoc_scaffold_179_curated_117
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116610..117260
DNA (651bp) protein (217aa)
TonB family protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QFK5_AZOSU
TonB family protein; K03832 periplasmic protein TonB
TonB family protein {ECO:0000313|EMBL:AEV26071.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
scnpilot_p_inoc_scaffold_179_curated_118
Thalassospira sp. HJ, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

117273..118325
DNA (1053bp) protein (351aa)
Hemin transport protein HemS n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2KWB8_9PROT
Hemin transporter {ECO:0000313|EMBL:KJE34097.1}; TaxID=1616823 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira sp. HJ.;"
hmuS; hemin transport protein; K07225 putative hemin transport protein
scnpilot_p_inoc_scaffold_179_curated_119
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

118330..119169
DNA (840bp) protein (280aa)
Hemin ABC transporter, substrate-binding component n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZD12_AZOL4
hmuT; Hemin ABC transporter, substrate-binding component; K02016 iron complex transport system substrate-binding protein
Hemin ABC transporter, substrate-binding component {ECO:0000313|EMBL:CBS89789.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
scnpilot_p_inoc_scaffold_179_curated_120
Rhodomicrobium udaipurense, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

119169..120149
DNA (981bp) protein (327aa)
Transport system permease protein n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I307_RHOVT
Hemin ABC transporter permease {ECO:0000313|EMBL:KAI93571.1}; TaxID=858455 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium udaipurense JA643.;"
transporter permease; K02015 iron complex transport system permease protein
Displaying items 91-120 of 181 in total

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