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scnpilot_p_inoc_scaffold_731_curated

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Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_731_curated_1
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..6499
DNA (6498bp) protein (2166aa)
Putative hemagglutinin/hemolysin-related protein n=1 Tax=Dickeya dadantii (strain 3937) RepID=E0SBQ1_DICD3
Putative calcium binding hemolysin protein {ECO:0000313|EMBL:KIL98497.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
hemagglutinin/hemolysin-like protein
scnpilot_p_inoc_scaffold_731_curated_2
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6644..7531
DNA (888bp) protein (296aa)
Putative Probable serine/threonine-protein kinase pknL {ECO:0000313|EMBL:CDL00026.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CDL00026.1};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
Putative Probable serine/threonine-protein kinase pknL n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F6U1_9PROT
Serine/threonine protein kinase
scnpilot_p_inoc_scaffold_731_curated_3
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7588..8367
DNA (780bp) protein (260aa)
short-chain dehydrogenase (EC:1.1.1.100)
Short-chain dehydrogenase/reductase SDR n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U125_9PROT
Putative Glucose 1-dehydrogenase 2 {ECO:0000313|EMBL:CDL00025.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
scnpilot_p_inoc_scaffold_731_curated_4
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8743..10638
DNA (1896bp) protein (632aa)
UvrABC system protein C n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U126_9PROT
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
uvrC; excinuclease ABC subunit C; K03703 excinuclease ABC subunit C
scnpilot_p_inoc_scaffold_731_curated_5
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10613..11212
DNA (600bp) protein (200aa)
Phosphatidylglycerophosphate synthetase {ECO:0000313|EMBL:CDL00022.1}; EC=2.7.8.5 {ECO:0000313|EMBL:CDL00022.1};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
phosphatidylglycerophosphate synthase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
Phosphatidylglycerophosphate synthetase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F3P8_9PROT
scnpilot_p_inoc_scaffold_731_curated_6
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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11209..11703
DNA (495bp) protein (165aa)
Molybdopterin-guanine dinucleotide biosynthesis protein B n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F6T6_9PROT
Molybdopterin-guanine dinucleotide biosynthesis protein B {ECO:0000313|EMBL:CDL00021.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
molybdopterin-guanine dinucleotide biosynthesis protein; K03753 molybdopterin-guanine dinucleotide biosynthesis protein B
scnpilot_p_inoc_scaffold_731_curated_7
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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11700..12959
DNA (1260bp) protein (420aa)
molybdopterin biosynthesis protein; K03750 molybdopterin molybdotransferase [EC:2.10.1.1]
Molybdopterin biosynthesis MoeA protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U129_9PROT
Molybdopterin biosynthesis MoeA protein {ECO:0000313|EMBL:CAM76586.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
scnpilot_p_inoc_scaffold_731_curated_8
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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12956..13207
DNA (252bp) protein (84aa)
ThiamineS n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U130_9PROT
Molybdopterin synthase sulfur carrier subunit {ECO:0000256|RuleBase:RU362014}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
molybdopterin converting factor, small subunit; K03636 molybdopterin synthase sulfur carrier subunit
scnpilot_p_inoc_scaffold_731_curated_9
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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13212..13682
DNA (471bp) protein (157aa)
molybdopterin converting factor, large subunit; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-]
Molybdopterin-converting factor large subunit n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U131_9PROT
Molybdenum cofactor biosynthesis protein E {ECO:0000313|EMBL:CDL00018.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
scnpilot_p_inoc_scaffold_731_curated_10
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13770..14126
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W3X4_MAGSA
Orf21 putative lipoprotein {ECO:0000313|EMBL:KIL98684.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_731_curated_11
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14144..14647
DNA (504bp) protein (168aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Methylobacterium extorquens (strain PA1) RepID=A9VZ98_METEP
DNA-directed RNA polymerase specialized sigma subunit sigma24-like protein {ECO:0000313|EMBL:KIL98685.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_p_inoc_scaffold_731_curated_12
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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14644..15411
DNA (768bp) protein (256aa)
Predicted transmembrane transcriptional regulator n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W3X6_MAGSA
transmembrane transcriptional regulator
Predicted transmembrane transcriptional regulator {ECO:0000313|EMBL:BAE51449.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
scnpilot_p_inoc_scaffold_731_curated_13
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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15470..16450
DNA (981bp) protein (327aa)
Beta-lactamase domain protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ANU7_AZOBR
beta-lactamase domain protein
Beta-lactamase domain protein {ECO:0000313|EMBL:CCD00920.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
scnpilot_p_inoc_scaffold_731_curated_14
Mesorhizobium sp. LSJC269B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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16529..18277
DNA (1749bp) protein (583aa)
UPI0003CE715E related cluster n=1 Tax=unknown RepID=UPI0003CE715E
RpoH suppressor {ECO:0000313|EMBL:ESW93134.1}; TaxID=1287326 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC269B00.;"
suhR; patatin
scnpilot_p_inoc_scaffold_731_curated_15
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18246..18851)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F6G3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDL01039.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
scnpilot_p_inoc_scaffold_731_curated_16
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(18957..19493)
DNA (537bp) protein (179aa)
Subunit of chromate transporter n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Y9A6_9PROT
Subunit of chromate transporter {ECO:0000313|EMBL:EME69601.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
chromate transporter; K07240 chromate transporter
scnpilot_p_inoc_scaffold_731_curated_17
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(19496..20032)
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00035C93C9
Chromate transport protein (Chra-like) {ECO:0000313|EMBL:EME69602.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
chromate transporter; K07240 chromate transporter
scnpilot_p_inoc_scaffold_731_curated_18
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(20029..21282)
DNA (1254bp) protein (418aa)
LysR family transcriptional regulator n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3AA37_9PROT
LysR family transcriptional regulator {ECO:0000313|EMBL:EME69603.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_731_curated_19
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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21528..22556
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI000315DEA6
dctP; TRAP dicarboxylate transporter subunit DctP
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
scnpilot_p_inoc_scaffold_731_curated_20
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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22654..23175
DNA (522bp) protein (174aa)
TRAP-type C4-dicarboxylate transport system, small permease component n=1 Tax=Betaproteobacteria bacterium MOLA814 RepID=V4YI73_9PROT
Uncharacterized protein {ECO:0000313|EMBL:BAO29425.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
hypothetical protein
scnpilot_p_inoc_scaffold_731_curated_21
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23172..24488
DNA (1317bp) protein (439aa)
Neu5Ac permease n=1 Tax=Betaproteobacteria bacterium MOLA814 RepID=V4Y1M8_9PROT
TRAP-type C4 dicarboxylate transport system large permease {ECO:0000313|EMBL:BAO29426.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
dctM5; TRAP-type C4 dicarboxylate transport system large permease
scnpilot_p_inoc_scaffold_731_curated_22
Pseudogulbenkiania sp. NH8B, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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24654..25742
DNA (1089bp) protein (363aa)
PrpF protein n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2IV23_PSEUL
PrpF protein; K09788 hypothetical protein
PrpF protein {ECO:0000313|EMBL:BAK77525.1}; TaxID=748280 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania sp. (strain NH8B).;"
scnpilot_p_inoc_scaffold_731_curated_23
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25813..26859
DNA (1047bp) protein (349aa)
4-oxalomesaconate hydratase; K10220 4-oxalmesaconate hydratase [EC:4.2.1.83]
4-Oxalomesaconate hydratase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2WAS0_MAGSA
4-oxalomesaconate hydratase {ECO:0000313|EMBL:BAO29037.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
scnpilot_p_inoc_scaffold_731_curated_24
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26862..27551
DNA (690bp) protein (230aa)
hypothetical protein; K10218 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
4-Hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2WAR9_MAGSA
4-Hydroxy-4-methyl-2-oxoglutarate aldolase {ECO:0000313|EMBL:BAE49056.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
scnpilot_p_inoc_scaffold_731_curated_25
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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27562..28479
DNA (918bp) protein (306aa)
6-phosphogluconate dehydrogenase, NAD-binding n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J1S4_RHOP2
6-phosphogluconate dehydrogenase
6-phosphogluconate dehydrogenase, NAD-binding {ECO:0000313|EMBL:ABD05586.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
scnpilot_p_inoc_scaffold_731_curated_26
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28507..30747
DNA (2241bp) protein (747aa)
Putative methyl-accepting chemotaxis protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F3N1_9PROT
Putative methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CDK99083.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
methyl-accepting chemotaxis protein
scnpilot_p_inoc_scaffold_731_curated_27
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30796..32007)
DNA (1212bp) protein (404aa)
Putative ferredoxin--NAD(+) reductase {ECO:0000313|EMBL:CCQ74511.1}; EC=1.18.1.- {ECO:0000313|EMBL:CCQ74511.1};; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00529 ferredoxin--NAD+ reductase [EC:1.18.1.3]
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A392_STAND
scnpilot_p_inoc_scaffold_731_curated_28
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32010..32333)
DNA (324bp) protein (108aa)
2Fe-2S ferredoxin (FdII) n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AXX5_AZOBR
2Fe-2S ferredoxin {ECO:0000313|EMBL:CCQ74510.1}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
fdxB; 2Fe-2S ferredoxin (FdII)
scnpilot_p_inoc_scaffold_731_curated_29
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32439..33602)
DNA (1164bp) protein (388aa)
Putative cytochrome P450 {ECO:0000313|EMBL:CCQ74509.1}; EC=1.14.-.- {ECO:0000313|EMBL:CCQ74509.1};; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
Putative cytochrome P450 n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AXX6_AZOBR
putative cytochrome P450
scnpilot_p_inoc_scaffold_731_curated_30
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33750..34652
DNA (903bp) protein (301aa)
Putative transcriptional regulator, AraC/XylS family n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AXX8_AZOBR
Putative Transcriptional regulator, AraC family {ECO:0000313|EMBL:CCQ74508.1}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
putative transcriptional regulator, AraC/XylS family
Displaying items 1-30 of 42 in total

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