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scnpilot_p_inoc_scaffold_595_curated

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Displaying items 31-57 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_595_curated_31
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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32842..35511
DNA (2670bp) protein (890aa)
Putative exported protein required for envelope biosynthesis and integrity n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F6Q7_9PROT
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; Flags: Precursor;; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
organic solvent tolerance protein OstA; K04744 LPS-assembly protein
scnpilot_p_inoc_scaffold_595_curated_32
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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35561..36829
DNA (1269bp) protein (423aa)
Chaperone SurA {ECO:0000256|SAAS:SAAS00043023}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
parvulin-like peptidyl-prolyl isomerase; K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
Putative PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F6X4_9PROT
scnpilot_p_inoc_scaffold_595_curated_33
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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36840..37847
DNA (1008bp) protein (336aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262); K00097 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
4-hydroxythreonine-4-phosphate dehydrogenase (4-(Phosphohydroxy)-L-threonine dehydrogenase) n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F8S2_9PROT
scnpilot_p_inoc_scaffold_595_curated_34
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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37844..38665
DNA (822bp) protein (274aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1430440 species="Bacteria; Proteobacteri
ksgA; dimethyladenosine transferase; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
Dimethyladenosine 16S ribosomal RNA transferase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F746_9PROT
scnpilot_p_inoc_scaffold_595_curated_35
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38723..40756
DNA (2034bp) protein (678aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F8X4_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDL01201.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
hypothetical protein
scnpilot_p_inoc_scaffold_595_curated_36
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(40809..41498)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F8R4_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDL01183.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
hypothetical protein
scnpilot_p_inoc_scaffold_595_curated_37
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(41703..42599)
DNA (897bp) protein (299aa)
Putative uncharacterized protein n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U267_9PROT
Putative cytokinin riboside 5'-monophosphate phosphoribohydrolase {ECO:0000313|EMBL:CDL01182.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
Rossmann fold nucleotide-binding protein; K06966
scnpilot_p_inoc_scaffold_595_curated_38
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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42746..43414
DNA (669bp) protein (223aa)
Putative metal-binding hydrolase {ECO:0000313|EMBL:CDL01181.1}; EC=3.1.2.6 {ECO:0000313|EMBL:CDL01181.1};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
Metallo-beta-lactamase family protein n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U266_9PROT
Zn-dependent hydrolase
scnpilot_p_inoc_scaffold_595_curated_39
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(43419..44180)
DNA (762bp) protein (254aa)
Putative uncharacterized protein n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SCV0_HAHCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC31524.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella chejuensis (strain KCTC 2396).;"
scnpilot_p_inoc_scaffold_595_curated_40
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44272..44457
DNA (186bp) protein (62aa)
Secreted protein n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U264_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDL01179.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
scnpilot_p_inoc_scaffold_595_curated_41
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44459..44881
DNA (423bp) protein (141aa)
Putative integral inner membrane protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F8R2_9PROT
Putative uncharacterized protein {ECO:0000313|EMBL:CAM76970.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
hypothetical protein; K08976 putative membrane protein
scnpilot_p_inoc_scaffold_595_curated_42
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44896..45750
DNA (855bp) protein (285aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154, ECO:0000313|EMBL:CDL01177.1};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000256|HAMAP-Rule:MF_00154}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
Putative Protoheme IX farnesyltransferase 1 n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F722_9PROT
Protoheme IX farnesyltransferase
scnpilot_p_inoc_scaffold_595_curated_43
unknown

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comp(45699..45896)
DNA (198bp) protein (66aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_595_curated_44
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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46007..46909
DNA (903bp) protein (301aa)
Transcriptional regulator n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TKC5_TISMK
mauR; transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
scnpilot_p_inoc_scaffold_595_curated_45
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(46952..47947)
DNA (996bp) protein (332aa)
Mg2+ and Co2+ transporters n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TW68_9PROT
Putative Mg2+ and Co2+ transporters {ECO:0000313|EMBL:CDL00070.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
hypothetical protein; K16074 zinc transporter
scnpilot_p_inoc_scaffold_595_curated_46
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48005..48487)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F6X9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDL00071.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
scnpilot_p_inoc_scaffold_595_curated_47
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48643..49227
DNA (585bp) protein (195aa)
Intracellular protease 1; K05520 protease I [EC:3.2.-.-]
Intracellular protease/amidase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TW66_9PROT
Intracellular protease/amidase {ECO:0000313|EMBL:CAM74873.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
scnpilot_p_inoc_scaffold_595_curated_48
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49271..49540
DNA (270bp) protein (90aa)
Uncharacterized protein n=2 Tax=Magnetospirillum gryphiswaldense RepID=V6F6E9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDL00073.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
hypothetical protein
scnpilot_p_inoc_scaffold_595_curated_49
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49597..49854
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=Magnetospirillum gryphiswaldense RepID=V6F3P7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDL00074.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
scnpilot_p_inoc_scaffold_595_curated_50
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50155..51708
DNA (1554bp) protein (518aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
guaA; GMP synthase (EC:6.3.5.2); K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TW63_9PROT
scnpilot_p_inoc_scaffold_595_curated_51
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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51834..53072
DNA (1239bp) protein (413aa)
Putative Phage integrase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIZ4_9BACT
putative phage integrase
Putative Phage integrase {ECO:0000313|EMBL:CBK43231.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
scnpilot_p_inoc_scaffold_595_curated_52
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(53259..54560)
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) RepID=I3UFW2_ADVKW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK63900.1}; TaxID=1036672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001); (Tetrathiobacter kashmirensis).;"
scnpilot_p_inoc_scaffold_595_curated_53
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(54645..55085)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2ZAP8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EME71480.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
XRE family transcriptional regulator
scnpilot_p_inoc_scaffold_595_curated_54
unknown

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55282..55737
DNA (456bp) protein (152aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_595_curated_55
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55734..56096
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3AFY8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EME71479.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
scnpilot_p_inoc_scaffold_595_curated_56
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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56156..56818
DNA (663bp) protein (221aa)
Site-specific recombinase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3AF47_9PROT
Site-specific recombinase {ECO:0000313|EMBL:EME71478.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
site-specific recombinase
scnpilot_p_inoc_scaffold_595_curated_57
unknown

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57547..57645
DNA (99bp) protein (33aa)

This feature has no annotations

Displaying items 31-57 of 57 in total

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