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scnpilot_p_inoc_scaffold_1497_curated

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1497_curated_1
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..1165)
DNA (1164bp) protein (388aa)
Methyl-accepting chemotaxis protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TY59_9PROT
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CAM75566.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
methyl-accepting chemotaxis protein
scnpilot_p_inoc_scaffold_1497_curated_2
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1336..1836)
DNA (501bp) protein (167aa)
Transcriptional regulator, AsnC family n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TY58_9PROT
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:CAM75565.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
transcriptional regulator
scnpilot_p_inoc_scaffold_1497_curated_3
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2105..2725
DNA (621bp) protein (207aa)
peroxiredoxin; K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15]
Alkyl hydroperoxide reducatase n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TY57_9PROT
Alkyl hydroperoxide reducatase {ECO:0000313|EMBL:CAM75564.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
scnpilot_p_inoc_scaffold_1497_curated_4
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2866..4890
DNA (2025bp) protein (675aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A-like n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F6M1_9PROT
multi-sensor hybrid histidine kinase
scnpilot_p_inoc_scaffold_1497_curated_5
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4986..5936
DNA (951bp) protein (317aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
Thioredoxin reductase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TY55_9PROT
scnpilot_p_inoc_scaffold_1497_curated_6
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6029..6922
DNA (894bp) protein (298aa)
Redox-sensitive transcriptional activator n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TY54_9PROT
Redox-sensitive transcriptional activator {ECO:0000313|EMBL:CAM75561.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
transcriptional regulator
scnpilot_p_inoc_scaffold_1497_curated_7
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7302..8240)
DNA (939bp) protein (313aa)
DnaJ-class molecular chaperone n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U3J9_9PROT
DnaJ-class molecular chaperone {ECO:0000313|EMBL:CAM77456.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
DnaJ-class molecular chaperone
scnpilot_p_inoc_scaffold_1497_curated_8
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8313..8789)
DNA (477bp) protein (159aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U3J8_9PROT
Putative uncharacterized protein {ECO:0000313|EMBL:CAM77455.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
omp; 17 kDa surface antigen
scnpilot_p_inoc_scaffold_1497_curated_9
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8906..9493
DNA (588bp) protein (196aa)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629, ECO:0000313|EMBL:CDL01271.1};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01629}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
pyridoxamine 5'-phosphate oxidase (EC:1.4.3.5); K00275 pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
Pyridoxamine 5'-phosphate oxidase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F915_9PROT
scnpilot_p_inoc_scaffold_1497_curated_10
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9490..10407
DNA (918bp) protein (306aa)
Cation efflux protein n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U3J6_9PROT
Zinc transporter {ECO:0000313|EMBL:CDL01270.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
Co/Zn/Cd cation transporter
scnpilot_p_inoc_scaffold_1497_curated_11
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10423..10899)
DNA (477bp) protein (159aa)
Transcriptional regulator n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U3J5_9PROT
Transcriptional regulator {ECO:0000313|EMBL:CAM77452.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
XRE family transcriptional regulator
scnpilot_p_inoc_scaffold_1497_curated_12
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11189..11611)
DNA (423bp) protein (141aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000313|EMBL:CDL01267.1};; Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
ndk; nucleoside diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6]
Nucleoside diphosphate kinase n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U3J1_9PROT
scnpilot_p_inoc_scaffold_1497_curated_13
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11900..13783
DNA (1884bp) protein (628aa)
Putative transporter subunits of ABC superfamily n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F913_9PROT
Putative transporter subunits of ABC superfamily {ECO:0000313|EMBL:CDL01266.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
ABC transporter ATPase; K06158 ATP-binding cassette, subfamily F, member 3
scnpilot_p_inoc_scaffold_1497_curated_14
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13937..15670
DNA (1734bp) protein (578aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CDL01265.1};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
Putative sensor-like histidine kinase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F6Z6_9PROT
C4-dicarboxylate transport sensor protein dctB
scnpilot_p_inoc_scaffold_1497_curated_15
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15740..17008
DNA (1269bp) protein (423aa)
HD-GYP domain n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F748_9PROT
HD-GYP domain {ECO:0000313|EMBL:CDL01264.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
HD-GYP domain-containing protein
scnpilot_p_inoc_scaffold_1497_curated_16
Pseudomonas sp. Chol1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17005..18105)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. Chol1 RepID=K5YIM4_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EKM95068.1}; TaxID=440512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Chol1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1497_curated_17
Phaeospirillum fulvum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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18213..19700
DNA (1488bp) protein (496aa)
5'-nucleotidase/2',3'-cyclic phosphodiesterase n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9SC42_PHAFV
5'-nucleotidase/2',3'-cyclic phosphodiesterase {ECO:0000313|EMBL:EPY01633.1}; TaxID=1316936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum fulvum MGU-K5.;"
5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterase
scnpilot_p_inoc_scaffold_1497_curated_18
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19735..19848)
DNA (114bp) protein (38aa)
Electron transfer flavoprotein (Alpha subunit) n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EZW6_9PROT
Electron transfer flavoprotein, alpha subunit {ECO:0000313|EMBL:CAM76994.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
etfA2; Electron transfer flavoprotein alpha-subunit; K03522 electron transfer flavoprotein alpha subunit
Displaying 18 items

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